RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SMTNP53814 917 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 SPAG1Q07617 926 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 STRN3Q13033 797 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 MXD4Q14582 209 aaPredicted RBP8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 KCNB1Q14721 858 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 TAF2Q6P1X5 1199 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 SLC39A4Q6P5W5 647 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 TRAF7Q6Q0C0 670 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 UBE2Q1Q7Z7E8 422 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 RSPH3Q86UC2 560 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 CEP120Q8N960 986 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 SPATA20Q8TB22 786 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 BADQ92934 168 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 FAM212AQ96EL1 285 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 GSDMAQ96QA5 445 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 ACCSQ96QU6 501 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 MED15Q96RN5 788 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 CBWD1Q9BRT8 395 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 TCHPQ9BT92 498 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 FUCA2Q9BTY2 467 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 EIF2AQ9BY44 585 aaKnown RBP8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 CXCL16Q9H2A7 254 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 KCND2Q9NZV8 630 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 ST3GAL5Q9UNP4 418 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 HES2Q9Y543 173 aa8.3□□□□□ -1.08
SF3A3P1-201ENST00000446317 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 TGFB1I1O43294 461 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 EVI5O60447 810 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CCDC192P0DO97 292 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CSF2RAP15509 400 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 RAG1P15918 1043 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 SELPP16109 830 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 LIG4P49917 911 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CRYBB1P53674 252 aaPredicted RBP8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PTENP60484 403 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PAK2Q13177 524 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 GPNMBQ14956 572 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PPP2R5AQ15172 486 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 AMHR2Q16671 573 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 FBXO47Q5MNV8 452 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CEP135Q66GS9 1140 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 FAM117BQ6P1L5 589 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 EPM2AIP1Q7L775 607 aaPredicted RBP8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 ANKRD33Q7Z3H0 272 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 TMEM192Q8IY95 271 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 THNSL1Q8IYQ7 743 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 ADSSL1Q8N142 457 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 LPPQ93052 612 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 TIPINQ9BVW5 301 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CCDC113Q9H0I3 377 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 RBSNQ9H1K0 784 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 CBX8Q9HC52 389 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 ANO10Q9NW15 660 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 KLK14Q9P0G3 267 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 ARHGAP28Q9P2N2 729 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
SF3A3P1-201ENST00000446317 PHLPP2Q6ZVD8 1323 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 EVPLQ92817 2033 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 MEIS3P2A8K0S8 358 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 GAS2O43903 313 aaKnown RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 PPP1R37O75864 691 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ARF4P18085 180 aaPredicted RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 EIF4BP23588 611 aaKnown RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 AKAP5P24588 427 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 TNFSF9P41273 254 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 CASP4P49662 377 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ACOT2P49753 483 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 GATMP50440 423 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 EPHB4P54760 987 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 PAK1Q13153 545 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 BFSP2Q13515 415 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 MAPK6Q16659 721 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 TPD52L1Q16890 204 aaPredicted RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ZNF568Q3ZCX4 644 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 LMBRD2Q68DH5 695 aaPredicted RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 CDCA2Q69YH5 1023 aaPredicted RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 ARMCX5Q6P1M9 558 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 EXOC8Q8IYI6 725 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 POMGNT1Q8WZA1 660 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 P2RX5Q93086 422 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 FAM213AQ9BRX8 229 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 TMX1Q9H3N1 280 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 PDZD7Q9H5P4 517 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 OLFML3Q9NRN5 406 aa8.28□□□□□ -1.08
SF3A3P1-201ENST00000446317 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms