RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
USE1-202ENST00000445667 MRPL9Q9BYD2 267 aaKnown RBP16.34■□□□□ 0.21
USE1-202ENST00000445667 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
USE1-202ENST00000445667 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
USE1-202ENST00000445667 TBC1D13Q9NVG8 400 aa16.34■□□□□ 0.21
USE1-202ENST00000445667 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
USE1-202ENST00000445667 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.21
USE1-202ENST00000445667 H3BQ06 376 aaPredicted RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 BCAR1P56945 870 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 ERVFC1P60507 584 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 UBE3AQ05086 875 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 SF3A1Q15459 793 aaKnown RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 ARL6IP4Q66PJ3 421 aaKnown RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 RBM23Q86U06 439 aaKnown RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 ZBTB8OSQ8IWT0 167 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 NECAB3Q96P71 396 aaPredicted RBP16.33■□□□□ 0.2
USE1-202ENST00000445667 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 GBP3Q9H0R5 595 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 NRDE2Q9H7Z3 1164 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 RSAD1Q9HA92 442 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 TLR9Q9NR96 1032 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 SPG21Q9NZD8 308 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 HES2Q9Y543 173 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 IPPQ9Y573 584 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
USE1-202ENST00000445667 TTLL13PA6NNM8 815 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 LINC01565O15544 149 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 ZC3H11AO75152 810 aaKnown RBP eCLIP16.32■□□□□ 0.2
USE1-202ENST00000445667 ITGA4P13612 1032 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 LIG1P18858 919 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 RNASELQ05823 741 aaKnown RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 MYO7AQ13402 2215 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 LEXMQ3ZCV2 418 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 ZNF280BQ86YH2 543 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 SLC39A11Q8N1S5 342 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 CCDC51Q96ER9 411 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 RUSC1Q9BVN2 902 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 APOL6Q9BWW8 343 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 FZD8Q9H461 694 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
USE1-202ENST00000445667 USP20Q9Y2K6 914 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 CLIC4Q9Y696 253 aa16.32■□□□□ 0.2
USE1-202ENST00000445667 SPTBN5Q9NRC6 3674 aaKnown RBP16.31■□□□□ 0.2
USE1-202ENST00000445667 A0A1B0GUA9 196 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 PER2O15055 1255 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 B4GALT3O60512 393 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 HIP1RO75146 1068 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 DDHD2O94830 711 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 NPTXRO95502 500 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 POMCP01189 267 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 PPM1AP35813 382 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 LTBRP36941 435 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 NAMPTP43490 491 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 NRIP1P48552 1158 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 KRT17Q04695 432 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 GRIN1Q05586 938 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
USE1-202ENST00000445667 RESTQ13127 1097 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 COL19A1Q14993 1142 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 CTC1Q2NKJ3 1217 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 HYIQ5T013 277 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 CABP7Q86V35 215 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 URGCPQ8TCY9 931 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 KIFAP3Q92845 792 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 SNX21Q969T3 373 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
USE1-202ENST00000445667 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 PRMT7Q9NVM4 692 aaPredicted RBP16.31■□□□□ 0.2
USE1-202ENST00000445667 DNAJB4Q9UDY4 337 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
USE1-202ENST00000445667 TCF20Q9UGU0 1960 aaKnown RBP16.31■□□□□ 0.2
USE1-202ENST00000445667 CNTNAP2Q9UHC6 1331 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 FSCN2O14926 492 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 NCK2O43639 380 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 EDN1P05305 212 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
USE1-202ENST00000445667 PRKCBP05771 671 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 GALTP07902 379 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 ADAM15Q13444 863 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 PPP2R5AQ15172 486 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 MAPK6Q16659 721 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 FAM187BQ17R55 369 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 PLPP4Q5VZY2 271 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 SLC27A1Q6PCB7 646 aa16.3■□□□□ 0.2
USE1-202ENST00000445667 C1orf186Q6ZWK4 172 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms