RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 RGS18Q9NS28 235 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 ST3GAL5Q9UNP4 418 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 NOC2LQ9Y3T9 749 aaKnown RBP9.03□□□□□ -0.96
LINC02549-201ENST00000445346 NR2E1Q9Y466 385 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 ZDBF2Q9HCK1 2354 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 NFASCO94856 1347 aa9.03□□□□□ -0.96
LINC02549-201ENST00000445346 ATG2AQ2TAZ0 1938 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 DDX39AO00148 427 aaKnown RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 FSCN2O14926 492 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 PRC1O43663 620 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 ARP10275 920 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 HOXB8P17481 243 aaPredicted RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 CHMLP26374 656 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 MCM5P33992 734 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 PHKA2P46019 1235 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 EPHA4P54764 986 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 MTMR3Q13615 1198 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 BMS1Q14692 1282 aaKnown RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 KIZQ2M2Z5 673 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 C4orf17Q53FE4 359 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TTC22Q5TAA0 569 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TMEM184AQ6ZMB5 413 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 SYNE3Q6ZMZ3 975 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TRMT1LQ7Z2T5 733 aaKnown RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 RAB11FIP4Q86YS3 637 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 CKAP2LQ8IYA6 745 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 MB21D2Q8IYB1 491 aaPredicted RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 KREMEN2Q8NCW0 462 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 CYP2W1Q8TAV3 490 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 CASP10Q92851 521 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 S1PR5Q9H228 398 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 NGRNQ9NPE2 291 aaKnown RBP9.02□□□□□ -0.97
LINC02549-201ENST00000445346 TMEM161AQ9NX61 479 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.97
LINC02549-201ENST00000445346 HIDE1A8MVS5 230 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 C9IYK1 514 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 FOSP01100 380 aaPredicted RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 PDGFBP01127 241 aaPredicted RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ZSCAN20P17040 1043 aaPredicted RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 PPM1AP35813 382 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 CRYBB1P53674 252 aaPredicted RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 NAPAP54920 295 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 FOXK2Q01167 660 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 EML3Q32P44 896 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 CEP55Q53EZ4 464 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ZNF484Q5JVG2 852 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 MIS18BP1Q6P0N0 1132 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 SYCE2Q6PIF2 218 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 KCNT2Q6UVM3 1135 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 UBALD2Q8IYN6 164 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 FANCBQ8NB91 859 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 RASGRP4Q8TDF6 673 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 PGBD1Q96JS3 809 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ZNF558Q96NG5 402 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 NECTIN4Q96NY8 510 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 OSMRQ99650 979 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 MTA3Q9BTC8 594 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 MFSD1Q9H3U5 465 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 CWH43Q9H720 699 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 AGO4Q9HCK5 861 aaKnown RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ZNF302Q9NR11 478 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 TCEAL9Q9UHQ7 104 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 SORCS3Q9UPU3 1222 aa9.01□□□□□ -0.97
LINC02549-201ENST00000445346 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
LINC02549-201ENST00000445346 COL1A2P08123 1366 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 SH2B2O14492 632 aaPredicted RBP9□□□□□ -0.97
LINC02549-201ENST00000445346 ATG7O95352 703 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 VTNP04004 478 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 GSPT1P15170 499 aaKnown RBP9□□□□□ -0.97
LINC02549-201ENST00000445346 ADCY7P51828 1080 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 FAM189BP81408 668 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 ITIH3Q06033 890 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 ITGB3BPQ13352 177 aaPredicted RBP9□□□□□ -0.97
LINC02549-201ENST00000445346 KCNC3Q14003 757 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 GAS6Q14393 721 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 SMC1AQ14683 1233 aaKnown RBP9□□□□□ -0.97
LINC02549-201ENST00000445346 DBN1Q16643 649 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 SWSAP1Q6NVH7 229 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 FAM228AQ86W67 206 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 MICU3Q86XE3 530 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 LRRC43Q8N309 656 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 VWA5B2Q8N398 1253 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 RNF169Q8NCN4 708 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 MAP4K1Q92918 833 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
LINC02549-201ENST00000445346 TMEM117Q9H0C3 514 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 ADAM7Q9H2U9 754 aa9□□□□□ -0.97
LINC02549-201ENST00000445346 SPG21Q9NZD8 308 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms