RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PSMB7Q99436 277 aa14.86□□□□□ -0.03
RBM39-216ENST00000444878 TLR10Q9BXR5 811 aa14.86□□□□□ -0.03
RBM39-216ENST00000444878 ASCC2Q9H1I8 757 aaPredicted RBP14.86□□□□□ -0.03
RBM39-216ENST00000444878 FAM53CQ9NYF3 392 aa14.86□□□□□ -0.03
RBM39-216ENST00000444878 PCDHGC5Q9Y5F6 944 aa14.86□□□□□ -0.03
RBM39-216ENST00000444878 SYNGAP1Q96PV0 1343 aa14.86□□□□□ -0.03
RBM39-216ENST00000444878 MCM3APO60318 1980 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 SPDYE5A6NIY4 337 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 ATG7O95352 703 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
RBM39-216ENST00000444878 CXCR5P32302 372 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 POLGP54098 1239 aaPredicted RBP14.85□□□□□ -0.03
RBM39-216ENST00000444878 CCDC181Q5TID7 509 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 CBWD2Q8IUF1 395 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 SAAL1Q96ER3 474 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
RBM39-216ENST00000444878 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
RBM39-216ENST00000444878 MAFBQ9Y5Q3 323 aaPredicted RBP14.85□□□□□ -0.03
RBM39-216ENST00000444878 DDX3XO00571 662 aaKnown RBP eCLIP14.84□□□□□ -0.031e-17■□□□□ 11
RBM39-216ENST00000444878 HNRNPDLO14979 420 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 OATP04181 439 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 ADRB2P07550 413 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 H2AFZP0C0S5 128 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 MXI1P50539 228 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 IFI16Q16666 785 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 C1orf220Q5T0J3 134 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 USP50Q70EL3 339 aaPredicted RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 H2AFVQ71UI9 128 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 PLEKHO2Q8TD55 490 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 HNRNPLLQ8WVV9 542 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 POMGNT1Q8WZA1 660 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 POLR3FQ9H1D9 316 aaPredicted RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 UBE2TQ9NPD8 197 aaPredicted RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 ADGRA3Q8IWK6 1321 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 ATP8B3O60423 1300 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 SOWAHBA6NEL2 793 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 H0YCG3 227 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 LRRN2O75325 713 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 TBC1D8O95759 1140 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 EDNRBP24530 442 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 PAFAH1B1P43034 410 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 NOP2P46087 812 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 VSNL1P62760 191 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 EMC2Q15006 297 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 LONRF2Q1L5Z9 754 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 EPC2Q52LR7 807 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 U2AF1L4Q8WU68 220 aaKnown RBP14.84□□□□□ -0.03
RBM39-216ENST00000444878 VTI1AQ96AJ9 217 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 CCDC127Q96BQ5 260 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 BICD1Q96G01 975 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 TMEM117Q9H0C3 514 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 KCNG1Q9UIX4 513 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 NENFQ9UMX5 172 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 AGTPBP1Q9UPW5 1226 aa14.84□□□□□ -0.03
RBM39-216ENST00000444878 SLC25A27O95847 323 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 FTCDO95954 541 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 ATP4AP20648 1035 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 ABCD1P33897 745 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 EPHX2P34913 555 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 C2orf54Q08AI8 447 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 PPIL2Q13356 520 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 NEDD9Q14511 834 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 BRDTQ58F21 947 aaPredicted RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 DNAAF5Q86Y56 855 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 GLYCTKQ8IVS8 523 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 INTUQ9ULD6 942 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 KCNH4Q9UQ05 1017 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 GRID2IPA4D2P6 1211 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 FOXN3O00409 490 aaPredicted RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 PMM2O15305 246 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 FARP2O94887 1054 aaPredicted RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 ITIH3Q06033 890 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 MEI1Q5TIA1 1274 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 CCDC70Q6NSX1 233 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 WDR93Q6P2C0 686 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 SLC39A4Q6P5W5 647 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 USP37Q86T82 979 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 LNX1Q8TBB1 728 aaPredicted RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 PARD3BQ8TEW8 1205 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 MPHOSPH6Q99547 160 aaKnown RBP14.83□□□□□ -0.04
RBM39-216ENST00000444878 ARHGAP28Q9P2N2 729 aa14.83□□□□□ -0.04
RBM39-216ENST00000444878 LRRC37A2A6NM11 1700 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 CNMDO75829 334 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 MCM3P25205 808 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 DNA2P51530 1060 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
RBM39-216ENST00000444878 BEND6Q5SZJ8 279 aaPredicted RBP14.82□□□□□ -0.04
RBM39-216ENST00000444878 KRT39Q6A163 491 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 EEPD1Q7L9B9 569 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 ZNF572Q7Z3I7 529 aaPredicted RBP14.82□□□□□ -0.04
RBM39-216ENST00000444878 ARHGEF19Q8IW93 802 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 SPATA4Q8NEY3 305 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 SLC30A5Q8TAD4 765 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 SLC7A3Q8WY07 619 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 OPTNQ96CV9 577 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 L3MBTL3Q96JM7 780 aaPredicted RBP14.82□□□□□ -0.04
RBM39-216ENST00000444878 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
RBM39-216ENST00000444878 ABCB6Q9NP58 842 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms