RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 THAP2Q9H0W7 228 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 MYLK2Q9H1R3 596 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 RIOX1Q9H6W3 641 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 PIDD1Q9HB75 910 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 KCNK9Q9NPC2 374 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 TAS2R14Q9NYV8 317 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 CTNNAL1Q9UBT7 734 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
CASP4-203ENST00000444739 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 PDXKO00764 312 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TP73O15350 636 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 SLC16A3O15427 465 aaKnown RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 ATP5HO75947 161 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 ACSL3O95573 720 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 EYA4O95677 639 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 GGPS1O95749 300 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 BRAFP15056 766 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TAC1P20366 129 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 CNGA1P29973 690 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 ATP5DP30049 168 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TNNI2P48788 182 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 CASP4P49662 377 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 SLC12A3P55017 1021 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.78□□□□□ -0.68
CASP4-203ENST00000444739 SH3RF3Q8TEJ3 882 aaPredicted RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 GRAMD1AQ96CP6 724 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TMEM237Q96Q45 408 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 MXD3Q9BW11 206 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 METTL14Q9HCE5 456 aaKnown RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 PCDHA12Q9UN75 941 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 ATF5Q9Y2D1 282 aaPredicted RBP10.78□□□□□ -0.68
CASP4-203ENST00000444739 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
CASP4-203ENST00000444739 TCRBV7S2A1N4TA0A589 114 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 ANKRD62A6NC57 917 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.68
CASP4-203ENST00000444739 CALUO43852 315 aaPredicted RBP10.77□□□□□ -0.68
CASP4-203ENST00000444739 BAG3O95817 575 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 NR3C1P04150 777 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 STX2P32856 288 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 COILP38432 576 aaPredicted RBP10.77□□□□□ -0.68
CASP4-203ENST00000444739 PDCD2Q16342 344 aaPredicted RBP10.77□□□□□ -0.68
CASP4-203ENST00000444739 C11orf63Q6NUN7 778 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 MTHFD1LQ6UB35 978 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 PALB2Q86YC2 1186 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 INPP5DQ92835 1189 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 NUDCD1Q96RS6 583 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 STK33Q9BYT3 514 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 GPR88Q9GZN0 384 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 DHX36Q9H2U1 1008 aaKnown RBP10.77□□□□□ -0.68
CASP4-203ENST00000444739 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.68
CASP4-203ENST00000444739 C2CD2Q9Y426 696 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 ASTN1O14525 1302 aa10.77□□□□□ -0.68
CASP4-203ENST00000444739 DOT1LQ8TEK3 1739 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 FAM170AA1A519 330 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 MYBL1P10243 752 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 ALDH3A1P30838 453 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 FOXN2P32314 431 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 POLGP54098 1239 aaPredicted RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 YARSP54577 528 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 KLC1Q07866 573 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 CTTNQ14247 550 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 DRAP1Q14919 205 aaPredicted RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 INTS5Q6P9B9 1019 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 TMEM154Q6P9G4 183 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 INTS8Q75QN2 995 aaKnown RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 APBB1IPQ7Z5R6 666 aaPredicted RBP10.77□□□□□ -0.69
CASP4-203ENST00000444739 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 FAM136AQ96C01 138 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 ERP27Q96DN0 273 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 IFT43Q96FT9 208 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 BORCS6Q96GS4 357 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 RPS6KC1Q96S38 1066 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 WDR35Q9P2L0 1181 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 CHKBQ9Y259 395 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 PTPN22Q9Y2R2 807 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 FRMPD4Q14CM0 1322 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 SPATA31A1Q5TZJ5 1347 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 PASKQ96RG2 1323 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.69
CASP4-203ENST00000444739 POTEFA5A3E0 1075 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 USP17L5A8MUK1 530 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 TCEA3O75764 348 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 CAPN15O75808 1086 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
CASP4-203ENST00000444739 TARSP26639 723 aaKnown RBP10.76□□□□□ -0.69
CASP4-203ENST00000444739 HIBADHP31937 336 aaKnown RBP10.76□□□□□ -0.69
CASP4-203ENST00000444739 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms