RNA–Protein interactions for RNA: ENST00000444092.5

HDLBP-221, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-221ENST00000444092 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 AGMOQ6ZNB7 445 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 SRGAP1Q7Z6B7 1085 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 ZDHHC14Q8IZN3 488 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 SLC22A17Q8WUG5 538 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 PRPF31Q8WWY3 499 aaKnown RBP11.24□□□□□ -0.61
HDLBP-221ENST00000444092 PSPC1Q8WXF1 523 aaKnown RBP11.24□□□□□ -0.61
HDLBP-221ENST00000444092 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-221ENST00000444092 MFSD1Q9H3U5 465 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 FAN1Q9Y2M0 1017 aa11.24□□□□□ -0.61
HDLBP-221ENST00000444092 ASAP2O43150 1006 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 EPB41L2O43491 1005 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 GFRA3O60609 400 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 DDHD2O94830 711 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 ERLIN2O94905 339 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 POMCP01189 267 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 YWHABP31946 246 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 RFC5P40937 340 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 LAMTOR4Q0VGL1 99 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 EPHA7Q15375 998 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 PTPN14Q15678 1187 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 NPY5RQ15761 445 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 XKR9Q5GH70 373 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 PPP4R3AQ6IN85 833 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 BCL7CQ8WUZ0 217 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 NAP1L4Q99733 375 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 LXNQ9BS40 222 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 TMEM175Q9BSA9 504 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 TM6SF1Q9BZW5 370 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 SMOC2Q9H3U7 446 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 SFXN1Q9H9B4 322 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 KCNMB3Q9NPA1 279 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
HDLBP-221ENST00000444092 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 VAV3Q9UKW4 847 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 CNTNAP2Q9UHC6 1331 aa11.23□□□□□ -0.61
HDLBP-221ENST00000444092 NRP1O14786 923 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 TBX3O15119 743 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 GAS2O43903 313 aaKnown RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 URODP06132 367 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 ITGA4P13612 1032 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 OR1G1P47890 313 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 CLCN4P51793 760 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 EMC2Q15006 297 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 OTOP3Q7RTS5 596 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 GPR149Q86SP6 731 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 C4orf19Q8IY42 314 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 RNF149Q8NC42 400 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 MTRQ99707 1265 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 ZFHX2Q9C0A1 2572 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-221ENST00000444092 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 SSX2IPQ9Y2D8 614 aa11.22□□□□□ -0.61
HDLBP-221ENST00000444092 C2CD2LO14523 706 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 B4GALT3O60512 393 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 NR1I2O75469 434 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 SOD2P04179 222 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 NCLP19338 710 aaKnown RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 AK2P54819 239 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 CYP4A11Q02928 519 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 SCRN1Q12765 414 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 CTTNQ14247 550 aaKnown RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 UBXN11Q5T124 520 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 FERMT3Q86UX7 667 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 TMEM105Q8N8V8 129 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 FLCNQ8NFG4 579 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 DYDC2Q96IM9 177 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 CCDC43Q96MW1 224 aaKnown RBP11.21□□□□□ -0.61
HDLBP-221ENST00000444092 VN1R3Q9BXE9 311 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 ZSWIM4Q9H7M6 989 aa11.21□□□□□ -0.61
HDLBP-221ENST00000444092 RGL1Q9NZL6 768 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms