RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 PGBD4Q96DM1 585 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 DUSP12Q9UNI6 340 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
TNXB-202ENST00000442721 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 PI15O43692 258 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 KLRC2P26717 231 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 PDIA3P30101 505 aaKnown RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 AFF1P51825 1210 aaKnown RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 PSMC5P62195 406 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 TDGQ13569 410 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 NPY5RQ15761 445 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 UBXN11Q5T124 520 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 PLA2G4FQ68DD2 849 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 CCDC105Q8IYK2 499 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 DAGLBQ8NCG7 672 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 URGCPQ8TCY9 931 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 NKD2Q969F2 451 aaPredicted RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 JPH2Q9BR39 696 aaPredicted RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 RSAD1Q9HA92 442 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 NCOA5Q9HCD5 579 aaKnown RBP13.34□□□□□ -0.27
TNXB-202ENST00000442721 PCDHA4Q9UN74 947 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 COL4A3BPQ9Y5P4 624 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 CNTNAP2Q9UHC6 1331 aa13.34□□□□□ -0.27
TNXB-202ENST00000442721 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.27
TNXB-202ENST00000442721 EML1O00423 815 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
TNXB-202ENST00000442721 PAPLNO95428 1278 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 EFEMP2O95967 443 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 LETM2Q2VYF4 491 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 SRGAP1Q7Z6B7 1085 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.28
TNXB-202ENST00000442721 FLCNQ8NFG4 579 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 RTP3Q9BQQ7 232 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 DHX33Q9H6R0 707 aaKnown RBP13.33□□□□□ -0.28
TNXB-202ENST00000442721 MINDY3Q9H8M7 445 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 KANSL3Q9P2N6 904 aa13.33□□□□□ -0.28
TNXB-202ENST00000442721 NRP1O14786 923 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 INPPL1O15357 1258 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 SLC37A4O43826 429 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 SOD2P04179 222 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 ALDH2P05091 517 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
TNXB-202ENST00000442721 NPEPPSP55786 919 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 PPP2R5CQ13362 524 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 BLIDQ8IZY5 108 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 RPS6KC1Q96S38 1066 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 MRPL17Q9NRX2 175 aaKnown RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 MARCH5Q9NX47 278 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 DDX25Q9UHL0 483 aaKnown RBP13.32□□□□□ -0.28
TNXB-202ENST00000442721 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 PPME1Q9Y570 386 aa13.32□□□□□ -0.28
TNXB-202ENST00000442721 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 LAMTOR4Q0VGL1 99 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 TOB2Q14106 344 aaPredicted RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 ANGPT1Q15389 498 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 CENPQQ7L2Z9 268 aaPredicted RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 TAS1R1Q7RTX1 841 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 COLGALT2Q8IYK4 626 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 SIX5Q8N196 739 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 SMG8Q8ND04 991 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
TNXB-202ENST00000442721 KCNMB3Q9NPA1 279 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 EPS15L1Q9UBC2 864 aa13.31□□□□□ -0.28
TNXB-202ENST00000442721 TEX28O15482 410 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 DEXIO95424 95 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 POMCP01189 267 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 URODP06132 367 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 PSMA5P28066 241 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 DSC1Q08554 894 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 SSRP1Q08945 709 aaKnown RBP13.3□□□□□ -0.28
TNXB-202ENST00000442721 NONOQ15233 471 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNXB-202ENST00000442721 KIAA0319Q5VV43 1072 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 GALNT17Q6IS24 598 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
TNXB-202ENST00000442721 PSPC1Q8WXF1 523 aaKnown RBP13.3□□□□□ -0.28
TNXB-202ENST00000442721 TMEM143Q96AN5 459 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms