RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PPP1R14BQ96C90 147 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 EPB41L1Q9H4G0 881 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 LRRC19Q9H756 370 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SSU72Q9NP77 194 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 DCP1AQ9NPI6 582 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 CIDEBQ9UHD4 219 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 CNTNAP4Q9C0A0 1308 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 TRAF5O00463 557 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PLSCR1O15162 318 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ONECUT3O60422 494 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 CCNT1O60563 726 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 GIT2Q14161 759 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SIX1Q15475 284 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 TMEM154Q6P9G4 183 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SAMD1Q6SPF0 538 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 KIF2BQ8N4N8 673 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 B4GALNT2Q8NHY0 566 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 RASGRP4Q8TDF6 673 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SCFD1Q8WVM8 642 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ARHGEF2Q92974 986 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 CD101Q93033 1021 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 EEF2KMTQ96G04 330 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PAIP2Q9BPZ3 127 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 TRIM4Q9C037 500 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 TANGO6Q9C0B7 1094 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 NT5C3AQ9H0P0 336 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 IL17RBQ9NRM6 502 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 MAPK13O15264 365 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 MAP3K13O43283 966 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PTPN4P29074 926 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 TECP42680 631 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 GALCP54803 685 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SNX1Q13596 522 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 HLFQ16534 295 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SLC45A4Q5BKX6 768 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 DHX37Q8IY37 1157 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 DENND1AQ8TEH3 1009 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 TGS1Q96RS0 853 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 CRAMP1Q96RY5 1269 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PLIN2Q99541 437 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 FOXP3Q9BZS1 431 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 MYLK2Q9H1R3 596 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PPCSQ9HAB8 311 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PCMTD2Q9NV79 361 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 SCOCQ9UIL1 159 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PPP1R9AQ9ULJ8 1098 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ZMYND8Q9ULU4 1186 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 BTBD19C9JJ37 291 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SMIM22K7EJ46 135 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 PDXKO00764 312 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 CETN3O15182 167 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 NVLO15381 856 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 SKIP12755 728 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 PLTPP55058 493 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 NCAPG2Q86XI2 1143 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SMC1BQ8NDV3 1235 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SLC35G2Q8TBE7 412 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 TMEM174Q8WUU8 243 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 NAP1L4Q99733 375 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 FAM167BQ9BTA0 163 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ATXN10Q9UBB4 475 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ARMCX3Q9UH62 379 aaPredicted RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 CHKBQ9Y259 395 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 RPS6KL1Q9Y6S9 549 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SPATA31A6Q5VVP1 1343 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 PASKQ96RG2 1323 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ANKRD62A6NC57 917 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ASMTLO95671 621 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ITIH2P19823 946 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 BCAMP50895 628 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 RNASELQ05823 741 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 AP1B1Q10567 949 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 UBE4AQ14139 1066 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 KIF22Q14807 665 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SETDB1Q15047 1291 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 ZRSR2Q15696 482 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 EXOC3L4Q17RC7 722 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 CCDC142Q17RM4 750 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 DAB2IPQ5VWQ8 1189 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 CEP128Q6ZU80 1094 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 MAIP1Q8WWC4 291 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 NUDCD1Q96RS6 583 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 TBC1D10AQ9BXI6 508 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 NMRK1Q9NWW6 199 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 LARSQ9P2J5 1176 aaKnown RBP8.44□□□□□ -1.06
LMO3-208ENST00000441439 ZNF212Q9UDV6 495 aa8.44□□□□□ -1.06
LMO3-208ENST00000441439 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
LMO3-208ENST00000441439 USP17L21D6R901 530 aa8.43□□□□□ -1.06
LMO3-208ENST00000441439 DNAJC6O75061 913 aa8.43□□□□□ -1.06
LMO3-208ENST00000441439 TJP3O95049 919 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms