RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 AMFRQ9UKV5 643 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 A8MUI8 341 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 SLC26A4O43511 780 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 IFNAR2P48551 515 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 NOVP48745 357 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 ADCY7P51828 1080 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 SNAP25P60880 206 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 COASYQ13057 564 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 DPY19L2P1Q6NXN4 242 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 TAOK1Q7L7X3 1001 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 NAF1Q96HR8 494 aaKnown RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 RIOX1Q9H6W3 641 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.82□□□□□ -0.36
LTBR-203ENST00000441074 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 SBF1O95248 1867 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 EVI5O60447 810 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 GJB6O95452 261 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 TTLL1O95922 423 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 EEF2P13639 858 aaKnown RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 EPS15P42566 896 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 TAF11Q15544 211 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 KIAA1755Q5JYT7 1200 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 ZDHHC24Q6UX98 284 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 COA7Q96BR5 231 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 CPSF2Q9P2I0 782 aaKnown RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
LTBR-203ENST00000441074 STK38LQ9Y2H1 464 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 ARL2BPQ9Y2Y0 163 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
LTBR-203ENST00000441074 KDM3AQ9Y4C1 1321 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 KIAA0391O15091 583 aaKnown RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 GH2P01242 217 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 NEFHP12036 1026 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 FERP16591 822 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 ATP4AP20648 1035 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 SKIV2L2P42285 1042 aaKnown RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 PLTPP55058 493 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 KCNH2Q12809 1159 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 FAM26FQ5R3K3 315 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 THEMIS2Q5TEJ8 643 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 APLFQ8IW19 511 aaPredicted RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 KIF2BQ8N4N8 673 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 DNAJC19Q96DA6 116 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 RXFP1Q9HBX9 757 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
LTBR-203ENST00000441074 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 LRRC42Q9Y546 428 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 PLIN4Q96Q06 1357 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
LTBR-203ENST00000441074 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 ABLIM1O14639 778 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 UCHL3P15374 230 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 GBP1P32455 592 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 LMNB2Q03252 620 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 TRAF1Q13077 416 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 PLS1Q14651 629 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 CLUL1Q15846 466 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 ASPRV1Q53RT3 343 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 MFSD5Q6N075 450 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 SLC30A9Q6PML9 568 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 SAMD7Q7Z3H4 446 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 VPS36Q86VN1 386 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 DNAAF5Q86Y56 855 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 NAP1L4Q99733 375 aaKnown RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 KANSL2Q9H9L4 492 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 WNT10BO00744 389 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 AP1G2O75843 785 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 ACTN1P12814 892 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 CCNB1P14635 433 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 RAB27AP51159 221 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 AUHQ13825 339 aaKnown RBP12.8□□□□□ -0.36
LTBR-203ENST00000441074 JAMLQ86YT9 394 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 FAM167BQ9BTA0 163 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
LTBR-203ENST00000441074 NT5C3AQ9H0P0 336 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms