RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 KANSL3Q9P2N6 904 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
UBE2D4-204ENST00000440899 CNTNAP2Q9UHC6 1331 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 ZBTB39O15060 712 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 SLITRK3O94933 977 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 ALDH2P05091 517 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 FDPSP14324 419 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 SLC11A1P49279 550 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 CYP4A11Q02928 519 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 NR5A1Q13285 461 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 MXD4Q14582 209 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 PCBP1Q15365 356 aaKnown RBP eCLIP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 ALYREFQ86V81 257 aaKnown RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 TPH2Q8IWU9 490 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 FBXL6Q8N531 539 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 RNF149Q8NC42 400 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 TNFRSF25Q93038 417 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 FAM193BQ96PV7 902 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 PRRX2Q99811 253 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 RSAD1Q9HA92 442 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 UBN1Q9NPG3 1134 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 DNAJB4Q9UDY4 337 aa12.97□□□□□ -0.33
UBE2D4-204ENST00000440899 FAM205CA6NFA0 338 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 ERLIN2O94905 339 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 LYPLA2O95372 231 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 AXLP30530 894 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 POU5F1BQ06416 359 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 UBXN11Q5T124 520 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 PPFIBP1Q86W92 1011 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 NECAB1Q8N987 351 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 SLC22A17Q8WUG5 538 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 MTRQ99707 1265 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 EIF2AK1Q9BQI3 630 aaKnown RBP12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 ANKEF1Q9NU02 776 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 CDH22Q9UJ99 828 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
UBE2D4-204ENST00000440899 B4GALT3O60512 393 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 DDHD2O94830 711 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 ITGA4P13612 1032 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 EPCAMP16422 314 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 MRE11P49959 708 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 AFF1P51825 1210 aaKnown RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 PTENP60484 403 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 TFDP1Q14186 410 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 CALCRLQ16602 461 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 ME3Q16798 604 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 C12orf76Q8N812 135 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 ASIC4Q96FT7 647 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 EMILIN2Q9BXX0 1053 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 XPNPEP1Q9NQW7 623 aa12.95□□□□□ -0.34
UBE2D4-204ENST00000440899 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 C2CD4DB7Z1M9 353 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 NRP1O14786 923 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 DGAT1O75907 488 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 KLRC2P26717 231 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 PTPN5P54829 565 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 TRIM29Q14134 588 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 IER5LQ5T953 404 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 CABP7Q86V35 215 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 UBALD2Q8IYN6 164 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 KREMEN2Q8NCW0 462 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 SMG8Q8ND04 991 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 CCDC43Q96MW1 224 aaKnown RBP12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 VN1R3Q9BXE9 311 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 CSRNP2Q9H175 543 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 PPP4R2Q9NY27 417 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 SORCS3Q9UPU3 1222 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 USTQ9Y2C2 406 aa12.94□□□□□ -0.34
UBE2D4-204ENST00000440899 ARL5CA6NH57 179 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 INO80B-WBP1J3KQ70 363 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 INPPL1O15357 1258 aa12.93□□□□□ -0.34
UBE2D4-204ENST00000440899 NEMFO60524 1076 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms