RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 OR14A2Q96R54 314 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 SPC25Q9HBM1 224 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 KLHL42Q9P2K6 505 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 EVC2Q86UK5 1308 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 CAMSAP1Q5T5Y3 1602 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 MROH2AA6NES4 1674 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 KDM5AP29375 1690 aaKnown RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 IFT172Q9UG01 1749 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 PRAMEF22A3QJZ6 481 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 KCNK3O14649 394 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC26A4O43511 780 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 FOXS1O43638 330 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 OPA1O60313 960 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ANAPC15P60006 121 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 CD83Q01151 205 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 AMPD3Q01432 767 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ALDH6A1Q02252 535 aaKnown RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADCY1Q08828 1119 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 R3HDM1Q15032 1099 aaKnown RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 PCOLCEQ15113 449 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 RNF151Q2KHN1 245 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SPDYAQ5MJ70 313 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 TRIM68Q6AZZ1 485 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZCCHC8Q6NZY4 707 aaKnown RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 OTOP1Q7RTM1 612 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SPRED1Q7Z699 444 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 HOMER1Q86YM7 354 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZNF341Q9BYN7 854 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 METTL14Q9HCE5 456 aaKnown RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SAE1Q9UBE0 346 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 SYNPO2Q9UMS6 1093 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADGRB1O14514 1584 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 MYO3AQ8NEV4 1616 aa4.35□□□□□ -1.71
HMGB3P11-201ENST00000440127 UBA6A0AVT1 1052 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 GOLGA6L22H0YM25 854 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 MPIG6BO95866 241 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 FSHBP01225 129 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ACO1P21399 889 aaKnown RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLFN5Q08AF3 891 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 CDSNQ15517 529 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 DGKDQ16760 1214 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 TKFCQ3LXA3 575 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 TTC38Q5R3I4 469 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 RNF207Q6ZRF8 634 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 C16orf86Q6ZW13 317 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZZZ3Q8IYH5 903 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 FUKQ8N0W3 1084 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ANKRD35Q8N283 1001 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 EXOC6Q8TAG9 804 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 STAG1Q8WVM7 1258 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ERCC4Q92889 916 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 GCDHQ92947 438 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC7A6OSQ96CW6 309 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 CFAP53Q96M91 514 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 FEZ1Q99689 392 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 PTPN18Q99952 460 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 DPYSL5Q9BPU6 564 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 PLA2G12BQ9BX93 195 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 AMNQ9BXJ7 453 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 KIAA1683Q9H0B3 1180 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 TMX1Q9H3N1 280 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 TRIM39Q9HCM9 518 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 SAMD15Q9P1V8 674 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 STK26Q9P289 416 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 PTPN22Q9Y2R2 807 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 CGNL1Q0VF96 1302 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZNF521Q96K83 1311 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 FANCIQ9NVI1 1328 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 POLR3AO14802 1390 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 NSD3Q9BZ95 1437 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 NEXMIFQ5QGS0 1516 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 PIK3C2BO00750 1634 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZC3H13Q5T200 1668 aaKnown RBP4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 RICTORQ6R327 1708 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 PPLO60437 1756 aa4.34□□□□□ -1.71
HMGB3P11-201ENST00000440127 RIMBP3CA6NJZ7 1639 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 RIMBP3BA6NNM3 1639 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 RIMBP3Q9UFD9 1639 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 AGLP35573 1532 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 PLEKHH1Q9ULM0 1364 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 M0R2C6 588 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 APAF1O14727 1248 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 KRT37O76014 449 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 ACRV1P26436 265 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 KIF11P52732 1056 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 GYS2P54840 703 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 BCAR1P56945 870 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 ABHD18Q0P651 414 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 TAF7LQ5H9L4 462 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 CATSPEREQ5SY80 951 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 PASD1Q8IV76 773 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 CCDC146Q8IYE0 955 aa4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 TRMT2AQ8IZ69 625 aaKnown RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 THEMISQ8N1K5 641 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P11-201ENST00000440127 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms