RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 AAK1Q2M2I8 961 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 PPP4R3CPQ6ZMV5 832 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 SPRYD3Q8NCJ5 442 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 DEPTORQ8TB45 409 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 SPPL3Q8TCT6 385 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 IFT74Q96LB3 600 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 USP28Q96RU2 1077 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 EIF2AQ9BY44 585 aaKnown RBP26.14■■□□□ 1.78
VARS-217ENST00000440048 CSRNP2Q9H175 543 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 FZD8Q9H461 694 aa26.14■■□□□ 1.78
VARS-217ENST00000440048 PRMT7Q9NVM4 692 aaPredicted RBP26.14■■□□□ 1.78
VARS-217ENST00000440048 BDP1A6H8Y1 2624 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 SSBP05455 408 aaKnown RBP eCLIP26.13■■□□□ 1.77
VARS-217ENST00000440048 LAG3P18627 525 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 TIGD5Q53EQ6 642 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 GLB1LQ6UWU2 654 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 AGMOQ6ZNB7 445 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 DAW1Q8N136 415 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 SYT2Q8N9I0 419 aaPredicted RBP26.13■■□□□ 1.77
VARS-217ENST00000440048 CALML4Q96GE6 196 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 ASB2Q96Q27 587 aa26.13■■□□□ 1.77
VARS-217ENST00000440048 FBXO2Q9UK22 296 aaPredicted RBP26.13■■□□□ 1.77
VARS-217ENST00000440048 HIP1RO75146 1068 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 OFD1O75665 1012 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 PLA2G4BP0C869 781 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 NCLP19338 710 aaKnown RBP26.12■■□□□ 1.77
VARS-217ENST00000440048 DNAJB1P25685 340 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 SLC12A3P55017 1021 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 FAM187BQ17R55 369 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 SMG8Q8ND04 991 aaKnown RBP26.12■■□□□ 1.77
VARS-217ENST00000440048 RSPH1Q8WYR4 309 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 PRIMPOLQ96LW4 560 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 KIFC3Q9BVG8 833 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 MRPL9Q9BYD2 267 aaKnown RBP26.12■■□□□ 1.77
VARS-217ENST00000440048 COG5Q9UP83 839 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 SRPRBQ9Y5M8 271 aaKnown RBP26.12■■□□□ 1.77
VARS-217ENST00000440048 MYH11P35749 1972 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 XIRP2A4UGR9 3374 aa26.12■■□□□ 1.77
VARS-217ENST00000440048 SPTBN5Q9NRC6 3674 aaKnown RBP26.11■■□□□ 1.77
VARS-217ENST00000440048 GUCY2CP25092 1073 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 MAPK7Q13164 816 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 CAMK1Q14012 370 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 KARSQ15046 597 aaKnown RBP26.11■■□□□ 1.77
VARS-217ENST00000440048 MAPK6Q16659 721 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 CSPP1Q1MSJ5 1256 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 NOMO2Q5JPE7 1267 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 FOXD4L5Q5VV16 416 aaPredicted RBP26.11■■□□□ 1.77
VARS-217ENST00000440048 CDR2LQ86X02 465 aaPredicted RBP26.11■■□□□ 1.77
VARS-217ENST00000440048 CNNM3Q8NE01 707 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 LRRC15Q8TF66 581 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 FOXD4L4Q8WXT5 416 aaPredicted RBP26.11■■□□□ 1.77
VARS-217ENST00000440048 CCDC113Q9H0I3 377 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 INPP5FQ9Y2H2 1132 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 IPPQ9Y573 584 aa26.11■■□□□ 1.77
VARS-217ENST00000440048 A0A1B0GUA9 196 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 FGF18O76093 207 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 CSPG5O95196 566 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 PRKCBP05771 671 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 PDIA4P13667 645 aaKnown RBP26.1■■□□□ 1.77
VARS-217ENST00000440048 PEX3P56589 373 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 SLC39A14Q15043 492 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 SPECC1Q5M775 1068 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 KCNT2Q6UVM3 1135 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 THNSL1Q8IYQ7 743 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 POF1BQ8WVV4 589 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 EPSTI1Q96J88 318 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 DRC1Q96MC2 740 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 ZNF558Q96NG5 402 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 TIPINQ9BVW5 301 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 CCSER1Q9C0I3 900 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 NSUN3Q9H649 340 aaKnown RBP26.1■■□□□ 1.77
VARS-217ENST00000440048 RSAD1Q9HA92 442 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 MORC2Q9Y6X9 1032 aaPredicted RBP26.1■■□□□ 1.77
VARS-217ENST00000440048 CNTNAP2Q9UHC6 1331 aa26.1■■□□□ 1.77
VARS-217ENST00000440048 TTLL13PA6NNM8 815 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 ZSCAN22P10073 491 aaPredicted RBP26.09■■□□□ 1.77
VARS-217ENST00000440048 ITGA4P13612 1032 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 LIG1P18858 919 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 PLCG1P19174 1290 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 PBX3P40426 434 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 EFNA5P52803 228 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 TCEAL5Q5H9L2 206 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 SLC27A1Q6PCB7 646 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 USP49Q70CQ1 688 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 RASSF8Q8NHQ8 419 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 CLIC6Q96NY7 704 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 TRIM6Q9C030 488 aaPredicted RBP26.09■■□□□ 1.77
VARS-217ENST00000440048 RNF39Q9H2S5 420 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 BLOC1S4Q9NUP1 217 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 TBC1D13Q9NVG8 400 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 HES2Q9Y543 173 aa26.09■■□□□ 1.77
VARS-217ENST00000440048 CCDC169A6NNP5 214 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 ACKR2O00590 384 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 NPTXRO95502 500 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 EDN1P05305 212 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 NPTX2P47972 431 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 NASPP49321 788 aaPredicted RBP26.08■■□□□ 1.77
VARS-217ENST00000440048 RAD51AP2Q09MP3 1159 aa26.08■■□□□ 1.77
VARS-217ENST00000440048 PRPF4BQ13523 1007 aaKnown RBP26.08■■□□□ 1.77
VARS-217ENST00000440048 KCND2Q9NZV8 630 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms