RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PIGOQ8TEQ8 1089 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 GBP3Q9H0R5 595 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 TMEM60Q9H2L4 133 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 MINDY3Q9H8M7 445 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 XPNPEP1Q9NQW7 623 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 KIAA1671Q9BY89 1806 aa20.9■□□□□ 0.94
CCDC78-204ENST00000439619 WDR81Q562E7 1941 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 WNT7AO00755 349 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 GLP2RO95838 553 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 ITGA4P13612 1032 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 HOXB8P17481 243 aaPredicted RBP20.89■□□□□ 0.93
CCDC78-204ENST00000439619 RABEP1Q15276 862 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 ZNF174Q15697 407 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 TTC38Q5R3I4 469 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 HAUS3Q68CZ6 603 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 TMEM184AQ6ZMB5 413 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 MRPL10Q7Z7H8 261 aaKnown RBP20.89■□□□□ 0.93
CCDC78-204ENST00000439619 CASP10Q92851 521 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 KHSRPQ92945 711 aaKnown RBP eCLIP20.89■□□□□ 0.93
CCDC78-204ENST00000439619 LRFN3Q9BTN0 628 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 POLR3CQ9BUI4 534 aaPredicted RBP20.89■□□□□ 0.93
CCDC78-204ENST00000439619 TRIM6Q9C030 488 aaPredicted RBP20.89■□□□□ 0.93
CCDC78-204ENST00000439619 HCN4Q9Y3Q4 1203 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 STK24Q9Y6E0 443 aa20.89■□□□□ 0.93
CCDC78-204ENST00000439619 BRWD1Q9NSI6 2320 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 NT5C1B-RDH14C9J2C7 533 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 USO1O60763 962 aaKnown RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 NCLP19338 710 aaKnown RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 HOXA11P31270 313 aaPredicted RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 ARL2P36404 184 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 CATSPER3Q86XQ3 398 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 IFNLR1Q8IU57 520 aaPredicted RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 RAB34Q9BZG1 259 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 POLR3FQ9H1D9 316 aaPredicted RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 NRDE2Q9H7Z3 1164 aa20.88■□□□□ 0.93
CCDC78-204ENST00000439619 DBR1Q9UK59 544 aaKnown RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 USP15Q9Y4E8 981 aaPredicted RBP20.88■□□□□ 0.93
CCDC78-204ENST00000439619 HIDE1A8MVS5 230 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 TSPAN1O60635 241 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 NR1I2O75469 434 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 CXCL14O95715 111 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 ALDH2P05091 517 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 GALTP07902 379 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 MUTP22033 750 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 CAPSQ13938 189 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 LLGL2Q6P1M3 1020 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 AGMOQ6ZNB7 445 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 DDX53Q86TM3 631 aaKnown RBP20.87■□□□□ 0.93
CCDC78-204ENST00000439619 ZBTB8OSQ8IWT0 167 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 IGSF21Q96ID5 467 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 KIF2CQ99661 725 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 TMEM175Q9BSA9 504 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 CSRNP2Q9H175 543 aa20.87■□□□□ 0.93
CCDC78-204ENST00000439619 ARHGEF35A5YM69 484 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 C2orf71A6NGG8 1288 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 SPATA31C1P0DKV0 1188 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 RPA1P27694 616 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 ANKRD54Q6NXT1 300 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 ASAP3Q8TDY4 903 aa20.86■□□□□ 0.93
CCDC78-204ENST00000439619 PHF7Q9BWX1 381 aaPredicted RBP20.86■□□□□ 0.93
CCDC78-204ENST00000439619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.85■□□□□ 0.93
CCDC78-204ENST00000439619 LRRIQ4A6NIV6 560 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 MEIS3P2A8K0S8 358 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 PRR33A8MZF0 331 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 MED24O75448 989 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 GLRA2P23416 452 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 MBTD1Q05BQ5 628 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 UBXN11Q5T124 520 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 CES5AQ6NT32 575 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 MAEAQ7L5Y9 396 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 VN1R2Q8NFZ6 395 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 C2orf40Q9H1Z8 148 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 FAN1Q9Y2M0 1017 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 IPPQ9Y573 584 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 PLXNA4Q9HCM2 1894 aa20.85■□□□□ 0.93
CCDC78-204ENST00000439619 FAM86C2PA6NEL3 165 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 POMCP01189 267 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 CTSAP10619 480 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 U2AF2P26368 475 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCDC78-204ENST00000439619 CCT6AP40227 531 aaKnown RBP20.84■□□□□ 0.93
CCDC78-204ENST00000439619 SLC11A1P49279 550 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 TMEM132AQ24JP5 1023 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 RNF135Q8IUD6 432 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 CPB2Q96IY4 423 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 PRIMPOLQ96LW4 560 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 ZBP1Q9H171 429 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 PRMT7Q9NVM4 692 aaPredicted RBP20.84■□□□□ 0.93
CCDC78-204ENST00000439619 DNAJB4Q9UDY4 337 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 IRAK3Q9Y616 596 aa20.84■□□□□ 0.93
CCDC78-204ENST00000439619 A0A087WWV3 80 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 LAD1O00515 517 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 ARF4P18085 180 aaPredicted RBP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 FXR2P51116 673 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 RBM10P98175 930 aaKnown RBP20.83■□□□□ 0.93
CCDC78-204ENST00000439619 ITIH3Q06033 890 aa20.83■□□□□ 0.93
CCDC78-204ENST00000439619 KCNC3Q14003 757 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms