RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 SIX5Q8N196 739 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 OR2W6PQ8NHA6 318 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 RAD54LQ92698 747 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CCDC124Q96CT7 223 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 SERPINI1Q99574 410 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 CCDC68Q9H2F9 335 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 TMEM60Q9H2L4 133 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 DHX36Q9H2U1 1008 aaKnown RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.8□□□□□ -1.32
BDNF-211ENST00000439476 FAM8A1Q9UBU6 413 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PCDHA6Q9UN73 950 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PCDHA8Q9Y5H6 950 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 PCDHA1Q9Y5I3 950 aa6.8□□□□□ -1.32
BDNF-211ENST00000439476 RIMS1Q86UR5 1692 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 A0A087X0B3 334 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 LRRN2O75325 713 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 DCTN3O75935 186 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 FAM107AO95990 144 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 VDRP11473 427 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 GNAT1P11488 350 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 YARSP54577 528 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 COASYQ13057 564 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 GRM4Q14833 912 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 UBE2SQ16763 222 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SMUG1Q53HV7 270 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 NSMFQ6X4W1 530 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 KSR1Q8IVT5 923 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 RBM41Q96IZ5 413 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 C7orf25Q9BPX7 421 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 NOP53Q9NZM5 478 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 NOC2LQ9Y3T9 749 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 SCINQ9Y6U3 715 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 LOC102724428A0A0B4J2F2 783 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 MEIS1O00470 390 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 GPC4O75487 556 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 MSL3P1P0C860 447 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SIK1P57059 783 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 HDLBPQ00341 1268 aaKnown RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 TROAPQ12815 778 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 MYO1EQ12965 1108 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SLC18A3Q16572 532 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 ERFEQ4G0M1 354 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 PDXDC2PQ6P474 469 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 SLX1AQ9BQ83 275 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 NOD1Q9Y239 953 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 RAD51CO43502 376 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 PRLRP16471 622 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 STX1BP61266 288 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
BDNF-211ENST00000439476 XKR9Q5GH70 373 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 RASIP1Q5U651 963 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SLFN13Q68D06 897 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 PPP1R18Q6NYC8 613 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 PPM1KQ8N3J5 372 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
BDNF-211ENST00000439476 CYFIP2Q96F07 1278 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 LRGUKQ96M69 825 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SLITRK6Q9H5Y7 841 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SPC25Q9HBM1 224 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 SCOCQ9UIL1 159 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 PXDNQ92626 1479 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 TMEM94Q12767 1356 aa6.79□□□□□ -1.32
BDNF-211ENST00000439476 A6NJR5 290 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 RPS6KA5O75582 802 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTLL1O95922 423 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 KRT19P08727 400 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SP4Q02446 784 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ODR4Q5SWX8 454 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ATG16L1Q676U5 607 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTI2Q6NXR4 508 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 KDM7AQ6ZMT4 941 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 NIM1KQ8IY84 436 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTC13Q8NBP0 860 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SLC44A5Q8NCS7 719 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 MYCBPAPQ8TBZ2 947 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 USP6NLQ92738 828 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TTC25Q96NG3 672 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TMEM260Q9NX78 707 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TMCC3Q9ULS5 477 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 PHF20L1A8MW92 1017 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 E9PMD0 336 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 DDX39AO00148 427 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 P4HA2O15460 535 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 OPHN1O60890 802 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 RTN2O75298 545 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 SYF2O95926 243 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 SLC16A2P36021 539 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 PMS2P54278 862 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 ARPC4P59998 168 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 COG7P83436 770 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 TAF11Q15544 211 aa6.78□□□□□ -1.32
BDNF-211ENST00000439476 EARS2Q5JPH6 523 aaKnown RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 C10orf62Q5T681 223 aaPredicted RBP6.78□□□□□ -1.32
BDNF-211ENST00000439476 ARHGEF16Q5VV41 709 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms