RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
APP-208ENST00000439274 K7ENM7 598 aa16.6■□□□□ 0.25
APP-208ENST00000439274 ECE2O60344 883 aa16.6■□□□□ 0.25
APP-208ENST00000439274 PAEPP09466 180 aa16.6■□□□□ 0.25
APP-208ENST00000439274 CCDC172P0C7W6 258 aa16.6■□□□□ 0.25
APP-208ENST00000439274 GCLMP48507 274 aa16.6■□□□□ 0.25
APP-208ENST00000439274 TBC1D10BQ4KMP7 808 aaPredicted RBP16.6■□□□□ 0.25
APP-208ENST00000439274 CEP55Q53EZ4 464 aa16.6■□□□□ 0.25
APP-208ENST00000439274 TTC27Q6P3X3 843 aa16.6■□□□□ 0.25
APP-208ENST00000439274 RPUSD2Q8IZ73 545 aaKnown RBP16.6■□□□□ 0.25
APP-208ENST00000439274 PRELID2Q8N945 189 aa16.6■□□□□ 0.25
APP-208ENST00000439274 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
APP-208ENST00000439274 NAP1L3Q99457 506 aaPredicted RBP16.6■□□□□ 0.25
APP-208ENST00000439274 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
APP-208ENST00000439274 GGA2Q9UJY4 613 aa16.6■□□□□ 0.25
APP-208ENST00000439274 RBBP6Q7Z6E9 1792 aaKnown RBP16.6■□□□□ 0.25
APP-208ENST00000439274 UBE4BO95155 1302 aa16.6■□□□□ 0.25
APP-208ENST00000439274 ARHGEF35A5YM69 484 aa16.6■□□□□ 0.25
APP-208ENST00000439274 DNM1LO00429 736 aa16.6■□□□□ 0.25
APP-208ENST00000439274 ATP2C2O75185 946 aa16.6■□□□□ 0.25
APP-208ENST00000439274 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
APP-208ENST00000439274 PTGIRP43119 386 aa16.6■□□□□ 0.25
APP-208ENST00000439274 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
APP-208ENST00000439274 STXBP4Q6ZWJ1 553 aa16.6■□□□□ 0.25
APP-208ENST00000439274 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
APP-208ENST00000439274 GRHL1Q9NZI5 618 aa16.6■□□□□ 0.25
APP-208ENST00000439274 TCRBV7S2A1N4TA0A589 114 aa16.59■□□□□ 0.25
APP-208ENST00000439274 MESDQ14696 234 aa16.59■□□□□ 0.25
APP-208ENST00000439274 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
APP-208ENST00000439274 NEK9Q8TD19 979 aa16.59■□□□□ 0.25
APP-208ENST00000439274 TATDN2Q93075 761 aa16.59■□□□□ 0.25
APP-208ENST00000439274 BTBD6Q96KE9 485 aa16.59■□□□□ 0.25
APP-208ENST00000439274 PCDHB18PQ96TA0 734 aa16.59■□□□□ 0.25
APP-208ENST00000439274 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
APP-208ENST00000439274 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
APP-208ENST00000439274 RPTORQ8N122 1335 aa16.59■□□□□ 0.25
APP-208ENST00000439274 GOLGA6L7A0A1B0GV03 622 aa16.59■□□□□ 0.25
APP-208ENST00000439274 RPL21P46778 160 aaKnown RBP16.59■□□□□ 0.25
APP-208ENST00000439274 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
APP-208ENST00000439274 SLC29A2Q14542 456 aa16.59■□□□□ 0.25
APP-208ENST00000439274 LLGL1Q15334 1064 aa16.59■□□□□ 0.25
APP-208ENST00000439274 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
APP-208ENST00000439274 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
APP-208ENST00000439274 SELENOSQ9BQE4 189 aa16.59■□□□□ 0.25
APP-208ENST00000439274 STRA6Q9BX79 667 aa16.59■□□□□ 0.25
APP-208ENST00000439274 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
APP-208ENST00000439274 AZI2Q9H6S1 392 aa16.59■□□□□ 0.25
APP-208ENST00000439274 MYH11P35749 1972 aa16.59■□□□□ 0.25
APP-208ENST00000439274 C5orf60A6NFR6 353 aa16.58■□□□□ 0.25
APP-208ENST00000439274 FAM187AA6NFU0 413 aa16.58■□□□□ 0.25
APP-208ENST00000439274 PHF2O75151 1096 aa16.58■□□□□ 0.25
APP-208ENST00000439274 SGPL1O95470 568 aa16.58■□□□□ 0.25
APP-208ENST00000439274 BCRP11274 1271 aa16.58■□□□□ 0.25
APP-208ENST00000439274 DRD4P21917 467 aa16.58■□□□□ 0.25
APP-208ENST00000439274 COMTP21964 271 aa16.58■□□□□ 0.25
APP-208ENST00000439274 EIF3BP55884 814 aaKnown RBP16.58■□□□□ 0.25
APP-208ENST00000439274 IFI35P80217 286 aaPredicted RBP16.58■□□□□ 0.25
APP-208ENST00000439274 DHX34Q14147 1143 aaKnown RBP16.58■□□□□ 0.25
APP-208ENST00000439274 DENND2CQ68D51 928 aa16.58■□□□□ 0.25
APP-208ENST00000439274 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.25
APP-208ENST00000439274 CACNA2D3Q8IZS8 1091 aa16.58■□□□□ 0.25
APP-208ENST00000439274 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.25
APP-208ENST00000439274 PRMT6Q96LA8 375 aaPredicted RBP16.58■□□□□ 0.25
APP-208ENST00000439274 CCDC114Q96M63 670 aa16.58■□□□□ 0.25
APP-208ENST00000439274 XPO6Q96QU8 1125 aaKnown RBP16.58■□□□□ 0.25
APP-208ENST00000439274 CEP89Q96ST8 783 aa16.58■□□□□ 0.25
APP-208ENST00000439274 ZSWIM1Q9BR11 485 aa16.58■□□□□ 0.25
APP-208ENST00000439274 SEMA4AQ9H3S1 761 aa16.58■□□□□ 0.25
APP-208ENST00000439274 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
APP-208ENST00000439274 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
APP-208ENST00000439274 CHN1P15882 459 aa16.58■□□□□ 0.24
APP-208ENST00000439274 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
APP-208ENST00000439274 PADI6Q6TGC4 694 aa16.58■□□□□ 0.24
APP-208ENST00000439274 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.24
APP-208ENST00000439274 HOOK3Q86VS8 718 aa16.58■□□□□ 0.24
APP-208ENST00000439274 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
APP-208ENST00000439274 CD248Q9HCU0 757 aa16.58■□□□□ 0.24
APP-208ENST00000439274 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
APP-208ENST00000439274 IPO5O00410 1097 aaKnown RBP16.57■□□□□ 0.24
APP-208ENST00000439274 VIL1P09327 827 aaKnown RBP16.57■□□□□ 0.24
APP-208ENST00000439274 NUDT17P0C025 328 aa16.57■□□□□ 0.24
APP-208ENST00000439274 PYGMP11217 842 aa16.57■□□□□ 0.24
APP-208ENST00000439274 FGFR4P22455 802 aa16.57■□□□□ 0.24
APP-208ENST00000439274 VAMP7P51809 220 aa16.57■□□□□ 0.24
APP-208ENST00000439274 ANKRD20A8PQ5CZ79 823 aa16.57■□□□□ 0.24
APP-208ENST00000439274 ERMARDQ5T6L9 678 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SLC9A9Q8IVB4 645 aa16.57■□□□□ 0.24
APP-208ENST00000439274 C3orf20Q8ND61 904 aa16.57■□□□□ 0.24
APP-208ENST00000439274 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
APP-208ENST00000439274 PTPN22Q9Y2R2 807 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SYNGAP1Q96PV0 1343 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SLCO1A2P46721 670 aa16.57■□□□□ 0.24
APP-208ENST00000439274 GPC5P78333 572 aa16.57■□□□□ 0.24
APP-208ENST00000439274 PPP2R5EQ16537 467 aa16.57■□□□□ 0.24
APP-208ENST00000439274 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
APP-208ENST00000439274 GKAP1Q5VSY0 366 aaPredicted RBP16.57■□□□□ 0.24
APP-208ENST00000439274 C11orf63Q6NUN7 778 aa16.57■□□□□ 0.24
APP-208ENST00000439274 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
APP-208ENST00000439274 ELMO3Q96BJ8 720 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms