RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 CLMNQ96JQ2 1002 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 FMO2Q99518 471 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 MXD3Q9BW11 206 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 MAF1Q9H063 256 aa16.94■□□□□ 0.3
DHFR-201ENST00000439211 SSU72P8A0A1W2PR75 194 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 ASAP2O43150 1006 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
DHFR-201ENST00000439211 CDK17Q00537 523 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 LLGL1Q15334 1064 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SLC18A3Q16572 532 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SFR1Q86XK3 245 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 DTX3LQ8TDB6 740 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 RNPEPL1Q9HAU8 725 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 C5orf60A6NFR6 353 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 AFPP02771 609 aaKnown RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 SERPINB3P29508 390 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 HOXA13P31271 388 aaPredicted RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 EIF3BP55884 814 aaKnown RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 USP46P62068 366 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 MYBPC3Q14896 1274 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 KBTBD12Q3ZCT8 623 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 CEP70Q8NHQ1 597 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 ANKS1AQ92625 1134 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 PRLRP16471 622 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SH3BGRP55822 239 aaPredicted RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 UBXN2AP68543 259 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 RNASELQ05823 741 aaKnown RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 MCL1Q07820 350 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
DHFR-201ENST00000439211 ZFYVE27Q5T4F4 411 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SLFN13Q68D06 897 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 MREGQ8N565 214 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 MCUR1Q96AQ8 359 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 ISCUQ9H1K1 167 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.93■□□□□ 0.31e-13■■■■■ 115.5
DHFR-201ENST00000439211 SLC12A4Q9UP95 1085 aa16.93■□□□□ 0.3
DHFR-201ENST00000439211 ZBTB5O15062 677 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 ATP9AO75110 1047 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 CFBP00751 764 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 STAT1P42224 750 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 PLTPP55058 493 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 CCNJLQ8IV13 435 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 GCNT4Q9P109 453 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 AMACRQ9UHK6 382 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 MYH10P35580 1976 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 SART1O43290 800 aaKnown RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 LBRQ14739 615 aaKnown RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 NAP1L3Q99457 506 aaPredicted RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 DDX50Q9BQ39 737 aaKnown RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
DHFR-201ENST00000439211 ARL2BPQ9Y2Y0 163 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 DAGLAQ9Y4D2 1042 aa16.92■□□□□ 0.3
DHFR-201ENST00000439211 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 SERPINB2P05120 415 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 PTK2Q05397 1052 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 NEK9Q8TD19 979 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
DHFR-201ENST00000439211 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 ZBTB21Q9ULJ3 1066 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 M0R2N6 131 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 MAP3K7O43318 606 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 ERVK-9P63128 1117 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 IRGCQ6NXR0 463 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 VPS52Q8N1B4 723 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 UCMAQ8WVF2 138 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 TRAPPC9Q96Q05 1148 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 A0A1W2PRG0 241 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 PGRMC1O00264 195 aaKnown RBP16.91■□□□□ 0.3
DHFR-201ENST00000439211 TNFAIP3P21580 790 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 TNFRSF8P28908 595 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 GJA8P48165 433 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 PTDSS1P48651 473 aaKnown RBP16.91■□□□□ 0.3
DHFR-201ENST00000439211 ERFP50548 548 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
DHFR-201ENST00000439211 CEP63Q96MT8 703 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 DUOX1Q9NRD9 1551 aa16.91■□□□□ 0.3
DHFR-201ENST00000439211 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
DHFR-201ENST00000439211 LRRN2O75325 713 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 GDF11O95390 407 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
DHFR-201ENST00000439211 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 BAP1Q92560 729 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 MTMR9Q96QG7 549 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
DHFR-201ENST00000439211 FGFBP2Q9BYJ0 223 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 AMFRQ9UKV5 643 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 RARAP10276 462 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms