RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 URODP06132 367 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 PAMP19021 973 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 ACOT2P49753 483 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 ZNF235Q14590 738 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 TRIP13Q15645 432 aaPredicted RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 MFSD1Q9H3U5 465 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 HEY1Q9Y5J3 304 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 ESRRBO95718 433 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 CALB1P05937 261 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 KRT3P12035 628 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 FBXW4P57775 412 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 RBL2Q08999 1139 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 ATF7IP2Q5U623 682 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 TMC7Q7Z402 723 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 RAB3IPQ96QF0 476 aaPredicted RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 C11orf70Q9BRQ4 267 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 WDR19Q8NEZ3 1342 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 F5H423 210 aaPredicted RBP12.93□□□□□ -0.34
NEK1-201ENST00000439128 EYA4O95677 639 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 DNAJB2P25686 324 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 GDAP1L1Q96MZ0 367 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 YIPF2Q9BWQ6 316 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 HAUS4Q9H6D7 363 aa12.93□□□□□ -0.34
NEK1-201ENST00000439128 MAP3K13O43283 966 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 ICAM1P05362 532 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 KLK14Q9P0G3 267 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 SERPING1P05155 500 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 VCAM1P19320 739 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 HERVK_113P62684 666 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 SV2CQ496J9 727 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 KRT39Q6A163 491 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 MUC3BQ9H195 1237 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 TSR3Q9UJK0 312 aaKnown RBP12.92□□□□□ -0.34
NEK1-201ENST00000439128 MCUR1Q96AQ8 359 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 KCNB1Q14721 858 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 FAM102AQ5T9C2 384 aaPredicted RBP12.92□□□□□ -0.34
NEK1-201ENST00000439128 TAS2R42Q7RTR8 314 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
NEK1-201ENST00000439128 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 HTATIP2Q9BUP3 242 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 SAMSN1Q9NSI8 373 aaKnown RBP12.92□□□□□ -0.34
NEK1-201ENST00000439128 BAG5Q9UL15 447 aa12.92□□□□□ -0.34
NEK1-201ENST00000439128 CXCL11O14625 94 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 MAFGO15525 162 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 IGSF3O75054 1194 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 NR1H3Q13133 447 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 DPCR1Q3MIW9 517 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 SPOPLQ6IQ16 392 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 RGMBQ6NW40 437 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 DEPDC1BQ8WUY9 529 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 CHAMP1Q96JM3 812 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 CNOT8Q9UFF9 292 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 ITM2BQ9Y287 266 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 TCP1P17987 556 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 NMT1P30419 496 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 SP3Q02447 781 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 NOGQ13253 232 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 TOB2Q14106 344 aaPredicted RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 SZRD1Q7Z422 152 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 VSIG1Q86XK7 387 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 EDEM3Q9BZQ6 932 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 TMEM88BA6NKF7 163 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 RSPH10B2B2RC85 870 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 WNT10BO00744 389 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 ECEL1O95672 775 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 RSPH10BP0C881 870 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 SULT1E1P49888 294 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 FAF2Q96CS3 445 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 H7C4K7 107 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 ADCY3O60266 1144 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 EVI5O60447 810 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 AMHP03971 560 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 KPNA2P52292 529 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 TMEM132BQ14DG7 1078 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 ANAPC7Q9UJX3 599 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 PPP2R2CQ9Y2T4 447 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 KPNA6O60684 536 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEK1-201ENST00000439128 CASP1P29466 404 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 EIF4A3P38919 411 aaKnown RBP12.91□□□□□ -0.34
NEK1-201ENST00000439128 GTF2H3Q13889 308 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 C10orf76Q5T2E6 689 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
NEK1-201ENST00000439128 AP1B1Q10567 949 aa12.9□□□□□ -0.34
NEK1-201ENST00000439128 RESTQ13127 1097 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms