RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FDXACB1Q9BRP7 624 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 SLKQ9H2G2 1235 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 CEP72Q9P209 647 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 PRSS50Q9UI38 385 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 GIT1Q9Y2X7 761 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 IFT140Q96RY7 1462 aa4.67□□□□□ -1.66
HMGB3P12-201ENST00000438745 A0A1W2PR48 441 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 GOLGA8BA8MQT2 603 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 CYR61O00622 381 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 LY86O95711 162 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 FSHBP01225 129 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 MASP1P48740 699 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 PDCD1Q15116 288 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 ATP13A4Q4VNC1 1196 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 STRA8Q7Z7C7 330 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 CACTINQ8WUQ7 758 aaKnown RBP4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 UIMC1Q96RL1 719 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 SCAND2PQ9GZW5 306 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 IFT22Q9H7X7 185 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 KCNG1Q9UIX4 513 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 PPP2R3BQ9Y5P8 575 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 XDHP47989 1333 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 CHD1O14646 1710 aa4.66□□□□□ -1.66
HMGB3P12-201ENST00000438745 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 CAPN14A8MX76 684 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 NEMP1O14524 444 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 NARSO43776 548 aaKnown RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 C1SP09871 688 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 RABGGTBP53611 331 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 SPIDRQ14159 915 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 RRP1BQ14684 758 aaKnown RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 DDB1Q16531 1140 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 FKBP15Q5T1M5 1219 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 MFSD5Q6N075 450 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 FERMT2Q96AC1 680 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 ZNF512Q96ME7 567 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 SORCS2Q96PQ0 1159 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 ANO3Q9BYT9 981 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 PRDM12Q9H4Q4 367 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 CAAP1Q9H8G2 361 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 ING3Q9NXR8 418 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 EVLQ9UI08 416 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 USP18Q9UMW8 372 aa4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 URB2Q14146 1524 aaKnown RBP4.65□□□□□ -1.67
HMGB3P12-201ENST00000438745 SMARCA4P51532 1647 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 ST20-MTHFSA0A0A6YYL1 179 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 ANKRD62A6NC57 917 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 KDM1AO60341 852 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 NRP2O60462 931 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 ULK1O75385 1050 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 ALDH1A2O94788 518 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 EYA4O95677 639 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 PEX11BO96011 259 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 VIL1P09327 827 aaKnown RBP4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 GDF5P43026 501 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 ID4P47928 161 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 SCNN1GP51170 649 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 DGCR2P98153 550 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 PTH1RQ03431 593 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 TRIM25Q14258 630 aaKnown RBP4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 TAF7LQ5H9L4 462 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 PITRM1Q5JRX3 1037 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 METTL24Q5JXM2 366 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 FNDC7Q5VTL7 733 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 C1QL3Q5VWW1 255 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 NAIF1Q69YI7 327 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 KRT40Q6A162 431 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 IGFL4Q6B9Z1 124 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 AFAP1L2Q8N4X5 818 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 MDGA1Q8NFP4 955 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 USP7Q93009 1102 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 TTC1Q99614 292 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 RCAN3Q9UKA8 241 aa4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 NOC2LQ9Y3T9 749 aaKnown RBP4.64□□□□□ -1.67
HMGB3P12-201ENST00000438745 KLRG2A4D1S0 409 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 NPIPB8E9PQR5 432 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 HOXA3O43365 443 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 RAB11FIP3O75154 756 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 SLPIP03973 132 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 NPEPPSP55786 919 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 SESN3P58005 492 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 ELAVL1Q15717 326 aaKnown RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 LSM12Q3MHD2 195 aaKnown RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 C19orf54Q5BKX5 351 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 Q6ZRM9 215 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 KRT26Q7Z3Y9 468 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 GSPT2Q8IYD1 628 aaKnown RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 CLRN3Q8NCR9 226 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 OR14C36Q8NHC7 312 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 PDCD2LQ9BRP1 358 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 PCED1AQ9H1Q7 454 aa4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 TOPORSQ9NS56 1045 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P12-201ENST00000438745 EIF4G3O43432 1585 aaKnown RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 NRP1O14786 923 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 BRINP1O60477 761 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 MFAP3LO75121 409 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 STC2O76061 302 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 CLEC2LP0C7M8 214 aa4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 XPAP23025 273 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P12-201ENST00000438745 WNT3AP56704 352 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms