RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 FAM126BQ8IXS8 530 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 CBARPQ8N350 705 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PPM1KQ8N3J5 372 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ARL6IP6Q8N6S5 226 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 LSMEM1Q8N8F7 131 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SPATA5Q8NB90 893 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PLEKHO2Q8TD55 490 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 NSUN6Q8TEA1 469 aaKnown RBP4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 NUP133Q8WUM0 1156 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SH3KBP1Q96B97 665 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 GCC1Q96CN9 775 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 TBC1D31Q96DN5 1066 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZBTB10Q96DT7 871 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 TRIM44Q96DX7 344 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SGCZQ96LD1 299 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 FAM167BQ9BTA0 163 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 CRB3Q9BUF7 120 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 RSAD1Q9HA92 442 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SMC4Q9NTJ3 1288 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 TBC1D22BQ9NU19 505 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 RRN3Q9NYV6 651 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SAP30BPQ9UHR5 308 aaKnown RBP4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 TPCN1Q9ULQ1 816 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PCDHB10Q9UN67 800 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 ANKRD6Q9Y2G4 727 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 PTPN22Q9Y2R2 807 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SNX5Q9Y5X3 404 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 SLC4A7Q9Y6M7 1214 aa4.23□□□□□ -1.73
HMGB1P12-201ENST00000438594 LTBP3Q9NS15 1303 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 M0R3H8 397 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 PLOD3O60568 738 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 DNAJC8O75937 253 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 PYGLP06737 847 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 EPHX1P07099 455 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 PLS3P13797 630 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GYS1P13807 737 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 KCNA2P16389 499 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZKSCAN1P17029 563 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CYP2C19P33261 490 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 HOXD12P35452 270 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GRK6P43250 576 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF132P52740 706 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 COPAP53621 1224 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 USP14P54578 494 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 BPIFB3P59826 476 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 G3BP1Q13283 466 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GRB10Q13322 594 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ADAM9Q13443 819 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GTF2H3Q13889 308 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 DCTN1Q14203 1278 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 HS1BP3Q53T59 392 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CCDC158Q5M9N0 1113 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GPATCH4Q5T3I0 446 aaKnown RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 RETSATQ6NUM9 610 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 HIBCHQ6NVY1 386 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZNF449Q6P9G9 518 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CHST15Q7LFX5 561 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CPA6Q8N4T0 437 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 RBBP8NLQ8NC74 664 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ZFPM2Q8WW38 1151 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CCT6BQ92526 530 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 LRGUKQ96M69 825 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 CLIC6Q96NY7 704 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 SPAG5Q96R06 1193 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 MTFR1LQ9H019 292 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 KLHL25Q9H0H3 589 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 GPRC5CQ9NQ84 441 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ANKEF1Q9NU02 776 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 MRGBPQ9NV56 204 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 PDP2Q9P2J9 529 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 ARHGAP28Q9P2N2 729 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 FTSJ1Q9UET6 329 aa4.22□□□□□ -1.73
HMGB1P12-201ENST00000438594 EYA2O00167 538 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 NEMP1O14524 444 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 NCAM2O15394 837 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 PRKD3O94806 890 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SNUPNO95149 360 aaKnown RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 KCNH1O95259 989 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 NPTXRO95502 500 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 CPP00450 1065 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 IDEP14735 1019 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 RHCEP18577 417 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 POU3F2P20265 443 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 TGM1P22735 817 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 RPS6KB1P23443 525 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 FPR2P25090 351 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 CHKAP35790 457 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 KRT20P35900 424 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 ID4P47928 161 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 TM4SF4P48230 202 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 EPHB4P54760 987 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 MLLT6P55198 1093 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SLC7A5Q01650 507 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 RHDQ02161 417 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 SCRN1Q12765 414 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 GRM1Q13255 1194 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 PDCD2Q16342 344 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 INAVAQ3KP66 663 aa4.21□□□□□ -1.74
HMGB1P12-201ENST00000438594 NRN1LQ496H8 165 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms