RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 B8ZZF3 427 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 GP1BBP13224 206 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 CCNE1P24864 410 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 SLC11A1P49279 550 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 HSD17B4P51659 736 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 IRX4P78413 519 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 CYP4F3Q08477 520 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 NME8Q8N427 588 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 ADAMTS14Q8WXS8 1223 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 OSMRQ99650 979 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 ARID3AQ99856 593 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
RTN4-211ENST00000438462 BRD9Q9H8M2 597 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 PAXBP1Q9Y5B6 917 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 CCDC163A0A0D9SF12 145 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 TGM5O43548 720 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 BCAR3O75815 825 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 RHOBTB1O94844 696 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 GNPTABQ3T906 1256 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 GBP3Q9H0R5 595 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
RTN4-211ENST00000438462 STK39Q9UEW8 545 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
RTN4-211ENST00000438462 PTPRQQ9UMZ3 2332 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 ITPR3Q14573 2671 aa12.84□□□□□ -0.35
RTN4-211ENST00000438462 TEX51A0A1B0GUA7 166 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 OPLAHO14841 1288 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 MEFVO15553 781 aaPredicted RBP12.83□□□□□ -0.36
RTN4-211ENST00000438462 EXTL3O43909 919 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 ZMYND10O75800 440 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 NOVP48745 357 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
RTN4-211ENST00000438462 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
RTN4-211ENST00000438462 TBC1D13Q9NVG8 400 aa12.83□□□□□ -0.36
RTN4-211ENST00000438462 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.36
RTN4-211ENST00000438462 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 DCLK1O15075 740 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
RTN4-211ENST00000438462 B4GALT3O60512 393 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 MAFO75444 373 aaPredicted RBP12.82□□□□□ -0.36
RTN4-211ENST00000438462 SOD2P04179 222 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
RTN4-211ENST00000438462 TANGO2Q6ICL3 276 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 GLYCTKQ8IVS8 523 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 SEMA4CQ9C0C4 833 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 NOTCH4Q99466 2003 aa12.82□□□□□ -0.36
RTN4-211ENST00000438462 FIBPO43427 364 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 FTH1P19P0C7X4 201 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 KIZQ2M2Z5 673 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 IRF7Q92985 503 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 ELSPBP1Q96BH3 223 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 TRIM4Q9C037 500 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 SMARCAD1Q9H4L7 1026 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 ZNF334Q9HCZ1 680 aaPredicted RBP12.81□□□□□ -0.36
RTN4-211ENST00000438462 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 ATG2BQ96BY7 2078 aa12.81□□□□□ -0.36
RTN4-211ENST00000438462 GSTTP1A0A1W2PQM5 241 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 APPP05067 770 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
RTN4-211ENST00000438462 GLUD2P49448 558 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 MRPS9P82933 396 aaKnown RBP12.8□□□□□ -0.36
RTN4-211ENST00000438462 GHRHRQ02643 423 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 LMAN2Q12907 356 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 GPR155Q7Z3F1 870 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 KRT25Q7Z3Z0 450 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 IL17BQ9UHF5 180 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
RTN4-211ENST00000438462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.8□□□□□ -0.365e-6■□□□□ 9.7
RTN4-211ENST00000438462 A0A0U1RQF3 1178 aa12.79□□□□□ -0.36
RTN4-211ENST00000438462 B4E1Z4 1266 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms