RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 VPS36Q86VN1 386 aa16.73■□□□□ 0.27
SGCE-205ENST00000437425 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
SGCE-205ENST00000437425 PSPC1Q8WXF1 523 aaKnown RBP16.73■□□□□ 0.27
SGCE-205ENST00000437425 POMGNT1Q8WZA1 660 aa16.73■□□□□ 0.27
SGCE-205ENST00000437425 MAML3Q96JK9 1138 aa16.73■□□□□ 0.27
SGCE-205ENST00000437425 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
SGCE-205ENST00000437425 COL1A2P08123 1366 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 RBAK-RBAKDNI3L0D1 243 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 ADCY3O60266 1144 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 HOXC6P09630 235 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 FERP16591 822 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 EIF4A3P38919 411 aaKnown RBP16.72■□□□□ 0.27
SGCE-205ENST00000437425 PRKCIP41743 596 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 KLHL30Q0D2K2 578 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 SREBF2Q12772 1141 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 TFDP1Q14186 410 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 PLCB4Q15147 1175 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 TDRD12Q587J7 1177 aaKnown RBP16.72■□□□□ 0.27
SGCE-205ENST00000437425 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 ZPBP2Q6X784 338 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 CCDC102AQ96A19 550 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 FAM81BQ96LP2 452 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 MFSD14AQ96MC6 490 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 APEX2Q9UBZ4 518 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
SGCE-205ENST00000437425 ATP8B3O60423 1300 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 ADGRA2Q96PE1 1338 aa16.72■□□□□ 0.27
SGCE-205ENST00000437425 LRRIQ4A6NIV6 560 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 ZNF233A6NK53 670 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 MAGEB2O15479 319 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 EXTL3O43909 919 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 ADSSP30520 456 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 STAT1P42224 750 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 ARHGAP25P42331 645 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 ASTE1Q2TB18 679 aaPredicted RBP16.71■□□□□ 0.27
SGCE-205ENST00000437425 CCDC122Q5T0U0 273 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 HGSNATQ68CP4 663 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 SAPCD2Q86UD0 394 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 ZBTB8OSQ8IWT0 167 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 KIFC3Q9BVG8 833 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 IFIH1Q9BYX4 1025 aaKnown RBP16.71■□□□□ 0.27
SGCE-205ENST00000437425 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 INTS2Q9H0H0 1204 aaKnown RBP16.71■□□□□ 0.27
SGCE-205ENST00000437425 SIX2Q9NPC8 291 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 REXO2Q9Y3B8 237 aaKnown RBP16.71■□□□□ 0.27
SGCE-205ENST00000437425 ADGRA3Q8IWK6 1321 aa16.71■□□□□ 0.27
SGCE-205ENST00000437425 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ANKRD63C9JTQ0 380 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 CTIFO43310 598 aaKnown RBP16.7■□□□□ 0.26
SGCE-205ENST00000437425 SLU7O95391 586 aaKnown RBP16.7■□□□□ 0.26
SGCE-205ENST00000437425 JAM2P57087 298 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TAF1CQ15572 869 aaPredicted RBP16.7■□□□□ 0.26
SGCE-205ENST00000437425 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 PDGFCQ9NRA1 345 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TRPC6Q9Y210 931 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 PCDHA13Q9Y5I0 950 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 PJA2O43164 708 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 SNAI1O95863 264 aaPredicted RBP16.7■□□□□ 0.26
SGCE-205ENST00000437425 SLC10A3P09131 477 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 MXI1P50539 228 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 SOX10P56693 466 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TUBB4BP68371 445 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 SLC18A3Q16572 532 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 CBWD6Q4V339 395 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 CBWD3Q5JTY5 395 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ZNF569Q5MCW4 686 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 CBWD5Q5RIA9 395 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
SGCE-205ENST00000437425 KRT39Q6A163 491 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 PARD3BQ8TEW8 1205 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TMEM8AQ9HCN3 771 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 FHOD1Q9Y613 1164 aa16.7■□□□□ 0.26
SGCE-205ENST00000437425 TLR2O60603 784 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 URI1O94763 535 aaPredicted RBP16.69■□□□□ 0.26
SGCE-205ENST00000437425 ACTN1P12814 892 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 HOXD8P13378 290 aaPredicted RBP16.69■□□□□ 0.26
SGCE-205ENST00000437425 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 CAPSQ13938 189 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 MORN1Q5T089 497 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 SMYD5Q6GMV2 418 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 IRF2BP2Q7Z5L9 587 aa16.69■□□□□ 0.26
SGCE-205ENST00000437425 RNF10Q8N5U6 811 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms