RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CTNNBL1Q8WYA6 563 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 UBE2TQ9NPD8 197 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 NCANO14594 1321 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 COL4A5P29400 1685 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 ELF1P32519 619 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 SSR1P43307 286 aaKnown RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 LMBR1Q8WVP7 490 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 GLG1Q92896 1179 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 HOMER2Q9NSB8 354 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 DCDC2CA8MYV0 355 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 LSP1P33241 339 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 NPEPPSP55786 919 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 ZNF844Q08AG5 666 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 DLGAP5Q15398 846 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 SYCE1Q8N0S2 351 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 CABS1Q96KC9 395 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 TMBIM4Q9HC24 238 aa11.26□□□□□ -0.61
CLSTN1-203ENST00000435891 MYO1FO00160 1098 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CUL1Q13616 776 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 UGCGQ16739 394 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 MIER3Q7Z3K6 550 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 KCTD17Q8N5Z5 321 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CEP120Q8N960 986 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 KRT35Q92764 455 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 SCLT1Q96NL6 688 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 GMLQ99445 158 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 PDGFDQ9GZP0 370 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 GOLGA8IPA6NC78 632 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 GOLGA8JA6NMD2 632 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CTNNA1P35221 906 aaKnown RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 GCKP35557 465 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CAP2P40123 477 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 ATP8B4Q8TF62 1192 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 UBLCP1Q8WVY7 318 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CCDC188H7C350 402 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 SKAP2O75563 359 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 RARRES1P49788 294 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 KIF22Q14807 665 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 SLC9A9Q8IVB4 645 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 FAM84AQ96KN4 292 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 AGPAT1Q99943 283 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 ATP8B3O60423 1300 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 UBE4BO95155 1302 aa11.25□□□□□ -0.61
CLSTN1-203ENST00000435891 GBP2P32456 591 aaPredicted RBP11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 KIFC3Q9BVG8 833 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 KCND2Q9NZV8 630 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 FTLP02792 175 aaPredicted RBP11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 PTGER2P43116 358 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 HSD17B4P51659 736 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 VAMP7P51809 220 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 UBAP2Q5T6F2 1119 aaKnown RBP11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 TMC3Q7Z5M5 1100 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 RIT2Q99578 217 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 ALG6Q9Y672 507 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 ANKRD62A6NC57 917 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 ATP9AO75110 1047 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 SGPL1O95470 568 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 ADRB2P07550 413 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 E2F5Q15329 346 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 STXBP4Q6ZWJ1 553 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 FMNL3Q8IVF7 1028 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 SEC14L1Q92503 715 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 TRIM6Q9C030 488 aaPredicted RBP11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 SLITRK6Q9H5Y7 841 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 HSPBP1Q9NZL4 362 aa11.24□□□□□ -0.61
CLSTN1-203ENST00000435891 CCDC189A1A4V9 331 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 SLC16A4O15374 487 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 TMOD1P28289 359 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 DHX9Q08211 1270 aaKnown RBP11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 NBPF9Q3BBW0 867 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 PLA2G4FQ68DD2 849 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 BTBD6Q96KE9 485 aa11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 CNOT8Q9UFF9 292 aaKnown RBP11.23□□□□□ -0.61
CLSTN1-203ENST00000435891 BACH1O14867 736 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms