RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HOXA13P31271 388 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 PPP3CCP48454 512 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ME3Q16798 604 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 DMAP1Q9NPF5 467 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 SLC25A13Q9UJS0 675 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 M0QYV0 167 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 TLR2O60603 784 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 DARSP14868 501 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 CHRNA3P32297 505 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 CARSP49589 748 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
SCN4A-201ENST00000435607 LRRC74AQ0VAA2 488 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 ANAPC7Q9UJX3 599 aa11.87□□□□□ -0.51
SCN4A-201ENST00000435607 LRG1P02750 347 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RLBP1P12271 317 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 SPDYAQ5MJ70 313 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RPAP1Q9BWH6 1393 aaPredicted RBP11.86□□□□□ -0.51
SCN4A-201ENST00000435607 CRKP46108 304 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 SERPINB10P48595 397 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 COG1Q8WTW3 980 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 SH3GLB2Q9NR46 395 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 SPATS2LQ9NUQ6 558 aaKnown RBP11.86□□□□□ -0.51
SCN4A-201ENST00000435607 NRBP1Q9UHY1 535 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 CDK8P49336 464 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 LRRC41Q15345 812 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 CCNYL1Q8N7R7 359 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 XXYLT1Q8NBI6 393 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 ENGASEQ8NFI3 743 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 SLC38A7Q9NVC3 462 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 IP6K2Q9UHH9 426 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 TEX28O15482 410 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RARBP10826 455 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RGS4P49798 205 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 GPSM2P81274 684 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 DHX9Q08211 1270 aaKnown RBP11.86□□□□□ -0.51
SCN4A-201ENST00000435607 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 ANKRD13CQ8N6S4 541 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 TSPAN17Q96FV3 270 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RAD18Q9NS91 495 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.86□□□□□ -0.51
SCN4A-201ENST00000435607 H0Y626 953 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 TRIM16O95361 564 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 ENOSF1Q7L5Y1 443 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L15C9J2P7 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L13C9JLJ4 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L11C9JVI0 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L18D6R9N7 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L22D6RA61 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L17D6RBQ6 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L19D6RCP7 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L20D6RJB6 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 ATP5HO75947 161 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 LIG3P49916 1009 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 USP17L24Q0WX57 530 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 CTTNQ14247 550 aaKnown RBP11.86□□□□□ -0.51
SCN4A-201ENST00000435607 FAM180AQ6UWF9 173 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 BBS7Q8IWZ6 715 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
SCN4A-201ENST00000435607 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 IL10P22301 178 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 ZNF512Q96ME7 567 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 DUOXA2Q1HG44 320 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 SLC30A1Q9Y6M5 507 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 KRT14P02533 472 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 MYBL1P10243 752 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 RGS2P41220 211 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 TRIP13Q15645 432 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 ZNF394Q53GI3 561 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 TESK2Q96S53 571 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PPARGC1AQ9UBK2 798 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PYGMP11217 842 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 EFNA5P52803 228 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 SYNE4Q8N205 404 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 USP13Q92995 863 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 UPP2O95045 317 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 STAG3L1P0CL83 205 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 PREPLQ4J6C6 727 aaPredicted RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 FASTKD1Q53R41 847 aaKnown RBP11.85□□□□□ -0.51
SCN4A-201ENST00000435607 HIST2H2AA3Q6FI13 130 aa11.85□□□□□ -0.51
SCN4A-201ENST00000435607 TMEM270Q6UE05 265 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms