RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 KANSL3Q9P2N6 904 aa13□□□□□ -0.33
CHRNA1-207ENST00000435083 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 LILRB3O75022 631 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 CDC45O75419 566 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 URODP06132 367 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 CFHP08603 1231 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 IFNAR1P17181 557 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 RFX1P22670 979 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 AK2P54819 239 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 NPEPPSP55786 919 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 PSMC5P62195 406 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 B3GNT9Q6UX72 402 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 ANO5Q75V66 913 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 PCDHA4Q9UN74 947 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 COL4A3BPQ9Y5P4 624 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 CNTNAP2Q9UHC6 1331 aa12.99□□□□□ -0.33
CHRNA1-207ENST00000435083 CYP3A7-CYP3A51PA0A087WV96 503 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SRGAP2CP0DJJ0 459 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 RPS6KB1P23443 525 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 CYP3A7P24462 503 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 INPPL1O15357 1258 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 N4BP1O75113 896 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SOD2P04179 222 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 ADH1AP07327 375 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 OR1G1P47890 313 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SSRP1Q08945 709 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 NONOQ15233 471 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 UBXN11Q5T124 520 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 ELMSAN1Q6PJG2 1045 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 TAS1R1Q7RTX1 841 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SRGAP1Q7Z6B7 1085 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 BLIDQ8IZY5 108 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 CMASQ8NFW8 434 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 ETNPPLQ8TBG4 499 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 STAMQ92783 540 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 TMEM143Q96AN5 459 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 CEP170P1Q96L14 293 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 MINDY3Q9H8M7 445 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 WNT16Q9UBV4 365 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 CA14Q9ULX7 337 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 SSX2IPQ9Y2D8 614 aa12.98□□□□□ -0.33
CHRNA1-207ENST00000435083 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 KRBA1A5PL33 1030 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 EML1O00423 815 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 TEX28O15482 410 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 GLUD1P00367 558 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 SPATA31D3P0C874 917 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 ITGA4P13612 1032 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 HOXA11P31270 313 aaPredicted RBP12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 QARSP47897 775 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 PSPC1Q8WXF1 523 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 KCNB2Q92953 911 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 WDR6Q9NNW5 1121 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
CHRNA1-207ENST00000435083 FAM186AA6NE01 2351 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 CLUHO75153 1309 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 DKC1O60832 514 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 RFPL2O75678 378 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 HSPA4P34932 840 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 GLUD2P49448 558 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 LAMTOR4Q0VGL1 99 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 INF2Q27J81 1249 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 MOXD1Q6UVY6 613 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 EXOC8Q8IYI6 725 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 FBXL16Q8N461 479 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 SLC44A3Q8N4M1 653 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 MYADMQ96S97 322 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 UBN1Q9NPG3 1134 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 MARCH5Q9NX47 278 aa12.96□□□□□ -0.33
CHRNA1-207ENST00000435083 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-207ENST00000435083 SLC37A4O43826 429 aa12.95□□□□□ -0.34
CHRNA1-207ENST00000435083 ERLIN2O94905 339 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms