RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 OFD1O75665 1012 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 GALTP07902 379 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 SRGAP2CP0DJJ0 459 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 NHLH1Q02575 133 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 LAMTOR4Q0VGL1 99 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 TRIM29Q14134 588 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 EMC2Q15006 297 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 FBXL6Q8N531 539 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 RNF149Q8NC42 400 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 HAS1Q92839 578 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 LPPQ93052 612 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 TMEM175Q9BSA9 504 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 RSAD1Q9HA92 442 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 SSX2IPQ9Y2D8 614 aa16.59■□□□□ 0.25
RPUSD3-208ENST00000433972 ALDH2P05091 517 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 PTPN5P54829 565 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 ATAT1Q5SQI0 421 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 MRPL10Q7Z7H8 261 aaKnown RBP16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 UBALD2Q8IYN6 164 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 TMEM143Q96AN5 459 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 APOL5Q9BWW9 433 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 IRF2BPLQ9H1B7 796 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 DPP7Q9UHL4 492 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 PCDHA12Q9UN75 941 aa16.58■□□□□ 0.24
RPUSD3-208ENST00000433972 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 NR1I2O75469 434 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 DGAT1O75907 488 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 POU5F1BQ06416 359 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 CALCRLQ16602 461 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 LONRF3Q496Y0 759 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 KIAA1841Q6NSI8 718 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 NOTUMQ6P988 496 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 CABP7Q86V35 215 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 DYDC2Q96IM9 177 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 ANKEF1Q9NU02 776 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 USTQ9Y2C2 406 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 FAN1Q9Y2M0 1017 aa16.57■□□□□ 0.24
RPUSD3-208ENST00000433972 NEMFO60524 1076 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 LYPLA2O95372 231 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 ITGA4P13612 1032 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 SLC11A1P49279 550 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 NUBP1P53384 320 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 CYP4A11Q02928 519 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 AGMOQ6ZNB7 445 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 TDRD5Q8NAT2 981 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 TRIM6Q9C030 488 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 POMKQ9H5K3 350 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 SFXN1Q9H9B4 322 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 MRPL17Q9NRX2 175 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 RGL1Q9NZL6 768 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 WRAP73Q9P2S5 460 aaPredicted RBP16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 DBR1Q9UK59 544 aaKnown RBP16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
RPUSD3-208ENST00000433972 SLITRK3O94933 977 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 HOXA11P31270 313 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 MRE11P49959 708 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 PTENP60484 403 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 RARS2Q5T160 578 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 TMEM173Q86WV6 379 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 ACSF2Q96CM8 615 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 NFKBIZQ9BYH8 718 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 BMP2KQ9NSY1 1161 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 DNAJB4Q9UDY4 337 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 DAXXQ9UER7 740 aaPredicted RBP16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 MUC6Q6W4X9 2439 aa16.55■□□□□ 0.24
RPUSD3-208ENST00000433972 MEIS3P2A8K0S8 358 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 INO80B-WBP1J3KQ70 363 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 LARGE1O95461 756 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 CTDNEP1O95476 244 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 URODP06132 367 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 KLRC2P26717 231 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 NR5A1Q13285 461 aa16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 IFNLR1Q8IU57 520 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-208ENST00000433972 ZDHHC14Q8IZN3 488 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms