RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 GCOM2Q9BZD3 368 aaPredicted RBP29.02■■■□□ 2.24
TMEM248-205ENST00000433271 SENP6Q9GZR1 1112 aaPredicted RBP29.02■■■□□ 2.24
TMEM248-205ENST00000433271 THAP9Q9H5L6 903 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 MINDY3Q9H8M7 445 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 AGPAT3Q9NRZ7 376 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 INO80B-WBP1J3KQ70 363 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 ZNF18P17022 549 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 ZC3H3Q8IXZ2 948 aaKnown RBP29.02■■■□□ 2.24
TMEM248-205ENST00000433271 TMEM174Q8WUU8 243 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 INO80BQ9C086 356 aaPredicted RBP29.02■■■□□ 2.24
TMEM248-205ENST00000433271 SIP14410 1827 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 ACKR2O00590 384 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 PIGRP01833 764 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 PRKCBP05771 671 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 RPL13P26373 211 aaKnown RBP29.01■■■□□ 2.23
TMEM248-205ENST00000433271 FAM187BQ17R55 369 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 CDKAL1Q5VV42 579 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 WNT8BQ93098 351 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 BICD1Q96G01 975 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 TRPV6Q9H1D0 765 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 GINS2Q9Y248 185 aa29.01■■■□□ 2.23
TMEM248-205ENST00000433271 HNRNPDLO14979 420 aaKnown RBP29■■■□□ 2.23
TMEM248-205ENST00000433271 B4GALT4O60513 344 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 NR3C1P04150 777 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 CRYBB1P53674 252 aaPredicted RBP29■■■□□ 2.23
TMEM248-205ENST00000433271 MRPS6P82932 125 aaKnown RBP29■■■□□ 2.23
TMEM248-205ENST00000433271 ADAM9Q13443 819 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 ZPBP2Q6X784 338 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 LRRC55Q6ZSA7 311 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 CEP63Q96MT8 703 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 MRPL4Q9BYD3 311 aaKnown RBP29■■■□□ 2.23
TMEM248-205ENST00000433271 CDHR5Q9HBB8 845 aa29■■■□□ 2.23
TMEM248-205ENST00000433271 PRMT7Q9NVM4 692 aaPredicted RBP29■■■□□ 2.23
TMEM248-205ENST00000433271 IQCF3P0C7M6 154 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 COL6A1P12109 1028 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 NR2F2P24468 414 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 MYBPC2Q14324 1141 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 SLC9A9Q8IVB4 645 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 C12orf56Q8IXR9 622 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 EEF2KMTQ96G04 330 aa28.99■■■□□ 2.23
TMEM248-205ENST00000433271 CELF4Q9BZC1 486 aaKnown RBP28.99■■■□□ 2.23
TMEM248-205ENST00000433271 KIAA0100Q14667 2235 aaKnown RBP28.99■■■□□ 2.23
TMEM248-205ENST00000433271 ANKRD63C9JTQ0 380 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 M0QZ92 97 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 CETN3O15182 167 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 CLIC2O15247 247 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 DARSP14868 501 aaKnown RBP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 LIG4P49917 911 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 SLC39A4Q6P5W5 647 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 IRF2BP1Q8IU81 584 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 OSMRQ99650 979 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 TARS2Q9BW92 718 aaKnown RBP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 DMAC2Q9NW81 257 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 TISP43B9A030 160 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 CSDE1O75534 798 aaKnown RBP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 EDN1P05305 212 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 EIF4BP23588 611 aaKnown RBP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 THPOP40225 353 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 PCBP1Q15365 356 aaKnown RBP eCLIP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 SLC39A5Q6ZMH5 540 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 FAM114A1Q8IWE2 563 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 FAM126BQ8IXS8 530 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 DHX38Q92620 1227 aaKnown RBP28.98■■■□□ 2.23
TMEM248-205ENST00000433271 PRIMPOLQ96LW4 560 aa28.98■■■□□ 2.23
TMEM248-205ENST00000433271 CAND2O75155 1236 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 CDK11BP21127 795 aaKnown RBP28.97■■■□□ 2.23
TMEM248-205ENST00000433271 ADSSP30520 456 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 PRPF4BQ13523 1007 aaKnown RBP28.97■■■□□ 2.23
TMEM248-205ENST00000433271 SNX17Q15036 470 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 TRIM71Q2Q1W2 868 aaKnown RBP28.97■■■□□ 2.23
TMEM248-205ENST00000433271 HSP90AA4PQ58FG1 418 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 FILIP1Q7Z7B0 1213 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 USP20Q9Y2K6 914 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 TRPV2Q9Y5S1 764 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 STYXL1Q9Y6J8 313 aa28.97■■■□□ 2.23
TMEM248-205ENST00000433271 MROH7Q68CQ1 1323 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 ATP1A3P13637 1013 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 AMHR2Q16671 573 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 SLFN12LQ6IEE8 588 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 ARMCX5Q6P1M9 558 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 DIS3LQ8TF46 1054 aaKnown RBP28.96■■■□□ 2.23
TMEM248-205ENST00000433271 ACO2Q99798 780 aaKnown RBP28.96■■■□□ 2.23
TMEM248-205ENST00000433271 CBWD1Q9BRT8 395 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 CDY2AQ9Y6F7 541 aa28.96■■■□□ 2.23
TMEM248-205ENST00000433271 TTLL13PA6NNM8 815 aa28.95■■■□□ 2.23
TMEM248-205ENST00000433271 GNA14O95837 355 aa28.95■■■□□ 2.23
TMEM248-205ENST00000433271 GARTP22102 1010 aa28.95■■■□□ 2.23
TMEM248-205ENST00000433271 C1orf53Q5VUE5 145 aa28.95■■■□□ 2.23
TMEM248-205ENST00000433271 TSHZ1Q6ZSZ6 1077 aa28.95■■■□□ 2.23
TMEM248-205ENST00000433271 MAGEC2Q9UBF1 373 aaPredicted RBP28.95■■■□□ 2.23
TMEM248-205ENST00000433271 CD4P01730 458 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 CHRNA1P02708 482 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 SPAG1Q07617 926 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 MGAT3Q09327 533 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 TCP11X2Q5H9J9 407 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 TMEM40Q8WWA1 233 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 CNTNAP2Q9UHC6 1331 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 KCNJ18B7U540 433 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 TOM1L1O75674 476 aa28.94■■■□□ 2.22
TMEM248-205ENST00000433271 ERLIN2O94905 339 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms