RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 GJB4Q9NTQ9 266 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DACT1Q9NYF0 836 aa10.56□□□□□ -0.72
CDC42-IT1-201ENST00000431803 A0A087WZ62 844 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TBX3O15119 743 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PBX3P40426 434 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PHKA2P46019 1235 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 QARSP47897 775 aaKnown RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DNM2P50570 870 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RBM10P98175 930 aaKnown RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HERC4Q5GLZ8 1057 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PLA2G4FQ68DD2 849 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RSPH1Q8WYR4 309 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SUSD6Q92537 303 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HAS1Q92839 578 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF558Q96NG5 402 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TCF25Q9BQ70 676 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 JPH2Q9BR39 696 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FDXACB1Q9BRP7 624 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 WRAP73Q9P2S5 460 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MUTYHQ9UIF7 546 aa10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HIDE1A8MVS5 230 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LOC730098B7Z3J9 87 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CCNT1O60563 726 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DTNBO60941 627 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 FDPSP14324 419 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 XBP1P17861 261 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 AK2P54819 239 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ANKRD1Q15327 319 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 EARS2Q5JPH6 523 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PLPP4Q5VZY2 271 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PIK3AP1Q6ZUJ8 805 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RHPN2Q8IUC4 686 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RNF135Q8IUD6 432 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SLC39A11Q8N1S5 342 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 RNF169Q8NCN4 708 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 HELQQ8TDG4 1101 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SLC7A3Q8WY07 619 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TNFRSF25Q93038 417 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NAP1L4Q99733 375 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 INO80BQ9C086 356 aaPredicted RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DHX33Q9H6R0 707 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ENTPD7Q9NQZ7 604 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PUF60Q9UHX1 559 aaKnown RBP10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PPME1Q9Y570 386 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
CDC42-IT1-201ENST00000431803 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 ZNF623O75123 536 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NEFLP07196 543 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 P4HBP07237 508 aaKnown RBP10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 SKIP12755 728 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NPEPPSP55786 919 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 BCAR1P56945 870 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 KRT17Q04695 432 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NR5A1Q13285 461 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 C4orf19Q8IY42 314 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 WASF1Q92558 559 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 GTF3C6Q969F1 213 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 NLRP4Q96MN2 994 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 LXNQ9BS40 222 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 S1PR5Q9H228 398 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 TECTAO75443 2155 aa10.53□□□□□ -0.72
CDC42-IT1-201ENST00000431803 C2orf71A6NGG8 1288 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 MEIS3P2A8K0S8 358 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 LARGE1O95461 756 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SRGAP2BP0DMP2 458 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 YWHABP31946 246 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 RFC5P40937 340 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ALDH7A1P49419 539 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 RAB27AP51159 221 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 EPHA7Q15375 998 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ME3Q16798 604 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TWF2Q6IBS0 349 aaKnown RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 GLB1LQ6UWU2 654 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 HFE2Q6ZVN8 426 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TMC7Q7Z402 723 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 TMEM173Q86WV6 379 aaPredicted RBP10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 EXOC8Q8IYI6 725 aa10.52□□□□□ -0.73
CDC42-IT1-201ENST00000431803 SLFN12Q8IYM2 578 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms