RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
RPL28-204ENST00000431533 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
RPL28-204ENST00000431533 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
RPL28-204ENST00000431533 GCOM2Q9BZD3 368 aaPredicted RBP17.11■□□□□ 0.33
RPL28-204ENST00000431533 ADAM7Q9H2U9 754 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 DZANK1Q9NVP4 752 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 SORCS3Q9UPU3 1222 aa17.11■□□□□ 0.33
RPL28-204ENST00000431533 A0A087WWV3 80 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPL28-204ENST00000431533 GJB2P29033 226 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 MCM2P49736 904 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 ATOH1Q92858 354 aaPredicted RBP17.1■□□□□ 0.33
RPL28-204ENST00000431533 ASIC4Q96FT7 647 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 ZDBF2Q9HCK1 2354 aa17.1■□□□□ 0.33
RPL28-204ENST00000431533 C2orf71A6NGG8 1288 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 H3BQV1 296 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 CXCL14O95715 111 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 RFC5P40937 340 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 TCF15Q12870 199 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 EMC2Q15006 297 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 ATAT1Q5SQI0 421 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
RPL28-204ENST00000431533 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 RAB27AP51159 221 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 KREMEN2Q8NCW0 462 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 PSPC1Q8WXF1 523 aaKnown RBP17.08■□□□□ 0.32
RPL28-204ENST00000431533 MTRQ99707 1265 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 HSD17B14Q9BPX1 270 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.32
RPL28-204ENST00000431533 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
RPL28-204ENST00000431533 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPL28-204ENST00000431533 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 BCAR1P56945 870 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 ORC2Q13416 577 aaPredicted RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 GLB1LQ6UWU2 654 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 CATSPER4Q7RTX7 472 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 ZNF598Q86UK7 904 aaKnown RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 PRPF31Q8WWY3 499 aaKnown RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
RPL28-204ENST00000431533 PPME1Q9Y570 386 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
RPL28-204ENST00000431533 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 GFRA3O60609 400 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 MED24O75448 989 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 PBX3P40426 434 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 PHKA2P46019 1235 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 LAMTOR4Q0VGL1 99 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 ANKEF1Q9NU02 776 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 DBR1Q9UK59 544 aaKnown RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
RPL28-204ENST00000431533 GTF3C3Q9Y5Q9 886 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 C5orf42Q9H799 3197 aa17.06■□□□□ 0.32
RPL28-204ENST00000431533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
RPL28-204ENST00000431533 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
RPL28-204ENST00000431533 USO1O60763 962 aaKnown RBP17.05■□□□□ 0.32
RPL28-204ENST00000431533 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPL28-204ENST00000431533 LYPLA2O95372 231 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 RARRES1P49788 294 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 TOB1P50616 345 aaPredicted RBP17.05■□□□□ 0.32
RPL28-204ENST00000431533 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 MAEAQ7L5Y9 396 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 CATSPER3Q86XQ3 398 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 RNF149Q8NC42 400 aa17.05■□□□□ 0.32
RPL28-204ENST00000431533 URGCPQ8TCY9 931 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms