RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 SKIP12755 728 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 KLRC2P26717 231 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 SMARCA1P28370 1054 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 MMP16P51512 607 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 CEP55Q53EZ4 464 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 SPECC1Q5M775 1068 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 TWF2Q6IBS0 349 aaKnown RBP8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 ECHDC2Q86YB7 292 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 KIAA0319LQ8IZA0 1049 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 SLC39A11Q8N1S5 342 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 C12orf76Q8N812 135 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 RUBCNQ92622 972 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 FAM193BQ96PV7 902 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 GBP3Q9H0R5 595 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 SMOC2Q9H3U7 446 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 PIDD1Q9HB75 910 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 IGSF9Q9P2J2 1179 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 CDH22Q9UJ99 828 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 DUSP12Q9UNI6 340 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 INPP5FQ9Y2H2 1132 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 EP300Q09472 2414 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 MYO10Q9HD67 2058 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 EVPLQ92817 2033 aa8.87□□□□□ -0.99
ECHDC1-207ENST00000430841 E7EWF7 191 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 PRC1O43663 620 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 KINO60870 393 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 PLEKHA8P1O95397 391 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 URODP06132 367 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 EPCAMP16422 314 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 SFPQP23246 707 aaKnown RBP eCLIP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 MCM5P33992 734 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 GCGRP47871 477 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 DNM2P50570 870 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 BCAR1P56945 870 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 NLRP11P59045 1033 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 SETQ01105 290 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 TBC1D8BQ0IIM8 1120 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 AP3B2Q13367 1082 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 AAMPQ13685 434 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 KCNC3Q14003 757 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 CWF19L1Q69YN2 538 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 SWSAP1Q6NVH7 229 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 MICU3Q86XE3 530 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 PLA2G4DQ86XP0 818 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 TEX2Q8IWB9 1127 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 TMEM40Q8WWA1 233 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 RIN2Q8WYP3 895 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 IRF7Q92985 503 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 RMDN1Q96DB5 314 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 PCYT2Q99447 389 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 ANO3Q9BYT9 981 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 AGO4Q9HCK5 861 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 CA14Q9ULX7 337 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 R4GN57 208 aa8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 MYH9P35579 1960 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-207ENST00000430841 hCG_1642624A0A1W2PR95 340 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 MED19A0JLT2 244 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SSBP05455 408 aaKnown RBP eCLIP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CYP21A2P08686 494 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CD46P15529 392 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 EIF4BP23588 611 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 RAB27AP51159 221 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CLCN3P51790 818 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SLC35G1Q2M3R5 365 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CCDC60Q8IWA6 550 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 PLEKHM2Q8IWE5 1019 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SMAP1Q8IYB5 467 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SPIRE2Q8WWL2 714 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 AUTS2Q8WXX7 1259 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 PHKBQ93100 1093 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 PGBD4Q96DM1 585 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SHDQ96IW2 340 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 TMEM87BQ96K49 555 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 ZNF577Q9BSK1 485 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 GCOM2Q9BZD3 368 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 INO80BQ9C086 356 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 ZBP1Q9H171 429 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 OSBPL3Q9H4L5 887 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 TBC1D17Q9HA65 648 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 KCNK12Q9HB15 430 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 MRPL17Q9NRX2 175 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 NRBP2Q9NSY0 501 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 TBC1D22BQ9NU19 505 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 NAP1L2Q9ULW6 460 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 SSX2IPQ9Y2D8 614 aa8.85□□□□□ -0.99
ECHDC1-207ENST00000430841 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 hCG_1984214I3L0E3 225 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 IPO5O00410 1097 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 C22orf31O95567 290 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 ADH1AP07327 375 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 ARP10275 920 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 CTSAP10619 480 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 RXRAP19793 462 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms