RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 MKL1Q969V6 931 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 KIF12Q96FN5 646 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 PRMT6Q96LA8 375 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 DDX23Q9BUQ8 820 aaKnown RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 AMNQ9BXJ7 453 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 COA1Q9GZY4 146 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 NUCKS1Q9H1E3 243 aaKnown RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 AZI2Q9H6S1 392 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SUCLA2Q9P2R7 463 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SWAP70Q9UH65 585 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 PTPN22Q9Y2R2 807 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 TLDC2A0PJX2 215 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 CLRN2A0PK11 232 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 HMGB1P1B2RPK0 211 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 KIAA0391O15091 583 aaKnown RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 TBCAO75347 108 aaKnown RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 FLOT1O75955 427 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 FSBPO95073 299 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 ADRB2P07550 413 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 PYGMP11217 842 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 PPP2R2AP63151 447 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 UGCGQ16739 394 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 DUPD1Q68J44 220 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF720Q7Z2F6 126 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SP8Q8IXZ3 490 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 HS6ST3Q8IZP7 471 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF526Q8TF50 670 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SEMA4DQ92854 862 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 TLCD1Q96CP7 247 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SEC16BQ96JE7 1060 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 LRRC27Q9C0I9 530 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 GOPCQ9HD26 462 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 SLC40A1Q9NP59 571 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 RNF14Q9UBS8 474 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
COL28A1-202ENST00000430711 ALG6Q9Y672 507 aa7.77□□□□□ -1.17
COL28A1-202ENST00000430711 DOCK5Q9H7D0 1870 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 EMSYQ7Z589 1322 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 LOC102724159A0A0B4J2E5 919 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 GMNCA6NCL1 334 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 CALUO43852 315 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 HIP1RO75146 1068 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 RASSF9O75901 435 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 FAM13AO94988 1023 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 HLA-DOAP06340 250 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 CHN1P15882 459 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 IFNAR2P48551 515 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 PTENP60484 403 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 DR1Q01658 176 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 SLC29A2Q14542 456 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 LRRC14Q15048 493 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 PWP2Q15269 919 aaKnown RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 SIX1Q15475 284 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 DACT2Q5SW24 774 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 LRCH2Q5VUJ6 765 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 TATDN1Q6P1N9 297 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 OTUD6AQ7L8S5 288 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 ANKS1BQ7Z6G8 1248 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 NOP9Q86U38 636 aaKnown RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 SLC47A2Q86VL8 602 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 SLFN12Q8IYM2 578 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 KIRREL3Q8IZU9 778 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 ATXN2LQ8WWM7 1075 aaKnown RBP7.76□□□□□ -1.17
COL28A1-202ENST00000430711 ATG4AQ8WYN0 398 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 RFFLQ8WZ73 363 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 TATDN2Q93075 761 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 PBKQ96KB5 322 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 KREMEN1Q96MU8 473 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 VCPKMTQ9H867 229 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 DMAC2Q9NW81 257 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 ZBTB21Q9ULJ3 1066 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 C10orf71Q711Q0 1435 aa7.76□□□□□ -1.17
COL28A1-202ENST00000430711 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 PPFIA2O75334 1257 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 GH1P01241 217 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CFHP08603 1231 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 BMP3P12645 472 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 KRT13P13646 458 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ITGB5P18084 799 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 COMTP21964 271 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CHRNA5P30532 468 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CIITAP33076 1130 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CHKAP35790 457 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF76P36508 570 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 USP8P40818 1118 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 STAT1P42224 750 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 RGS19P49795 217 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MMP14P50281 582 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 WNT7BP56706 349 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MYL7Q01449 175 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ADCY1Q08828 1119 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 FSTL1Q12841 308 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CUL1Q13616 776 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MESDQ14696 234 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ABCB5Q2M3G0 1257 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ODR4Q5SWX8 454 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MCTP2Q6DN12 878 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms