RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 IRS1P35568 1242 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 ALDH7A1P49419 539 aaKnown RBP12.56□□□□□ -0.4
MRPL55-221ENST00000430433 KRT17Q04695 432 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 HYAL1Q12794 435 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 UBXN11Q5T124 520 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
MRPL55-221ENST00000430433 HACE1Q8IYU2 909 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 CNNM3Q8NE01 707 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 BSNDQ8WZ55 320 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
MRPL55-221ENST00000430433 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
MRPL55-221ENST00000430433 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-221ENST00000430433 GBP3Q9H0R5 595 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 CSRNP2Q9H175 543 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 TBC1D13Q9NVG8 400 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 NCOR1O75376 2440 aa12.56□□□□□ -0.4
MRPL55-221ENST00000430433 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 H3BQ06 376 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 B4GALT5O43286 388 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 OFD1O75665 1012 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 SSBP05455 408 aaKnown RBP eCLIP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 ITGA4P13612 1032 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 LIG1P18858 919 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 NCLP19338 710 aaKnown RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 SYT1P21579 422 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 NAMPTP43490 491 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 BCAR1P56945 870 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 AMHR2Q16671 573 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 LEXMQ3ZCV2 418 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 CDCA2Q69YH5 1023 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 AGMOQ6ZNB7 445 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 MRPL10Q7Z7H8 261 aaKnown RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 KIFAP3Q92845 792 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 TLE6Q9H808 572 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 POLD4Q9HCU8 107 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 PRMT7Q9NVM4 692 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-221ENST00000430433 LZTS1Q9Y250 596 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 IPPQ9Y573 584 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 BDP1A6H8Y1 2624 aa12.55□□□□□ -0.4
MRPL55-221ENST00000430433 CARNS1A5YM72 827 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 NPTXRO95502 500 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PRKCBP05771 671 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 GTF2F1P35269 517 aaKnown RBP eCLIP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 UBA7P41226 1012 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 NRIP1P48552 1158 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 ERVFC1P60507 584 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PRPF4BQ13523 1007 aaKnown RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 MAPK6Q16659 721 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 ADGRD2Q7Z7M1 963 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 CABP7Q86V35 215 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 SLC39A11Q8N1S5 342 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 TMEM169Q96HH4 297 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 AK8Q96MA6 479 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 FAM193BQ96PV7 902 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 PLIN2Q99541 437 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 RUSC1Q9BVN2 902 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 UBN1Q9NPG3 1134 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 HES2Q9Y543 173 aa12.54□□□□□ -0.4
MRPL55-221ENST00000430433 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
MRPL55-221ENST00000430433 CCDC169A6NNP5 214 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 HIP1RO75146 1068 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 POMCP01189 267 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
MRPL55-221ENST00000430433 CA8P35219 290 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 MLH1P40692 756 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 NDUFV1P49821 464 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 EFNA5P52803 228 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
MRPL55-221ENST00000430433 FAM187BQ17R55 369 aa12.53□□□□□ -0.4
MRPL55-221ENST00000430433 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
MRPL55-221ENST00000430433 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms