RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 DDIASQ8IXT1 998 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 LXNQ9BS40 222 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 TEX12Q9BXU0 123 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 DIAPH2O60879 1101 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 CASP8Q14790 479 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 GSPT2Q8IYD1 628 aaKnown RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 TTC13Q8NBP0 860 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 EIF2AQ9BY44 585 aaKnown RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 UTYO14607 1347 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 ROR1Q01973 937 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 RGS9BPQ6ZS82 235 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 RPAP3Q9H6T3 665 aaPredicted RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 WARS2Q9UGM6 360 aaKnown RBP16.37■□□□□ 0.21
PTPRF-206ENST00000429895 SYNGAP1Q96PV0 1343 aa16.37■□□□□ 0.21
PTPRF-206ENST00000429895 H0Y3Z8 333 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 NCK2O43639 380 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 FLOT2Q14254 428 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 PRCPP42785 496 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 GPS1Q13098 491 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 VEPH1Q14D04 833 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 FSCBQ5H9T9 825 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 SYCP2LQ5T4T6 812 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 CCDC90BQ9GZT6 254 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 GYG2O15488 501 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ING2Q9H160 280 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 PLEKHG1Q9ULL1 1385 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 UPP2O95045 317 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 MCF2P10911 925 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 SKIP12755 728 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 MORF4L2Q15014 288 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 OR6J1Q8NGC5 347 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 SEPT8Q92599 483 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ADA2Q9NZK5 511 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ATP9BO43861 1147 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 PRR29P0C7W0 189 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 GUCY2CP25092 1073 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 ZNF235Q14590 738 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 KRT39Q6A163 491 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 DACH2Q96NX9 599 aa16.36■□□□□ 0.21
PTPRF-206ENST00000429895 PYGBP11216 843 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 RALAP11233 206 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 PPP1R36Q96LQ0 422 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 DAB2P98082 770 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 KNOP1Q1ED39 458 aaKnown RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 TRIM45Q9H8W5 580 aaPredicted RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 RBAKQ9NYW8 714 aaPredicted RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 DCTN4Q9UJW0 460 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 AFF2P51816 1311 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 ADGRL2O95490 1459 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 HMBSP08397 361 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 TBXAS1P24557 533 aaPredicted RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 WDR48Q8TAF3 677 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 IP6K2Q9UHH9 426 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 ZFP69BQ9UJL9 534 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 CTSHP09668 335 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 CLCN6P51797 869 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 DRAP1Q14919 205 aaPredicted RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 EFTUD2Q15029 972 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■■■■□ 21.5
PTPRF-206ENST00000429895 FASTKD1Q53R41 847 aaKnown RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 PGBD3Q8N328 593 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 MROH7-TTC4A0A0A0MT08 1334 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 PP2D1A8MPX8 630 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 H7C1W4 665 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 DCTN3O75935 186 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 SFNP31947 248 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 COL15A1P39059 1388 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 PDIA2Q13087 525 aaKnown RBP16.35■□□□□ 0.21
PTPRF-206ENST00000429895 AATKQ6ZMQ8 1374 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 SLC9A2Q9UBY0 812 aa16.35■□□□□ 0.21
PTPRF-206ENST00000429895 USP6P35125 1406 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 MYO1DO94832 1006 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 KCNA2P16389 499 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 COPB2P35606 906 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 GYS2P54840 703 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 RFWD2Q8NHY2 731 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 NAF1Q96HR8 494 aaKnown RBP16.34■□□□□ 0.21
PTPRF-206ENST00000429895 TJP2Q9UDY2 1190 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
PTPRF-206ENST00000429895 FTLP02792 175 aaPredicted RBP16.34■□□□□ 0.21
PTPRF-206ENST00000429895 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
PTPRF-206ENST00000429895 ZC3H4Q9UPT8 1303 aaKnown RBP16.34■□□□□ 0.21
PTPRF-206ENST00000429895 F5H6K3 240 aa16.34■□□□□ 0.21
PTPRF-206ENST00000429895 IRF1P10914 325 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms