RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 KHDC1Q4VXA5 237 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 REXO1Q8N1G1 1221 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 ENDOVQ8N8Q3 282 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 RBBP8NLQ8NC74 664 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 ZNF333Q96JL9 665 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 PWWP2AQ96N64 755 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 VCXQ9H320 206 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 SLCO1B3Q9NPD5 702 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 ATP9AO75110 1047 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 EPHA7Q15375 998 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 USP17L2Q6R6M4 530 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 PRUNE1Q86TP1 453 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 ZC3H18Q86VM9 953 aaKnown RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 CPNE8Q86YQ8 564 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 LRRC37BQ96QE4 947 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 PIGSQ96S52 555 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 TMEM47Q9BQJ4 181 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 COL18A1P39060 1754 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 GNA11P29992 359 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CHRNA3P32297 505 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CASP4P49662 377 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 POLGP54098 1239 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 JAM2P57087 298 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CCDC6Q16204 474 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 PPP2R5EQ16537 467 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 KYNUQ16719 465 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 IRGCQ6NXR0 463 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 TRIM74Q86UV6 250 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 TRIM73Q86UV7 250 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 FAM81AQ8TBF8 368 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 LRRC8CQ8TDW0 803 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ART4Q93070 314 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 NSUN4Q96CB9 384 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 MAGEB18Q96M61 343 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 DDX50Q9BQ39 737 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SCOCQ9UIL1 159 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ALG6Q9Y672 507 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 RPS6KL1Q9Y6S9 549 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SLIT2O94813 1529 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 AKAP3O75969 853 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 KCNA3P22001 575 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SERPINB4P48594 390 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 LRRC23Q53EV4 343 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 MIGA2Q7L4E1 593 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SLC30A5Q8TAD4 765 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 NRG4Q8WWG1 115 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ROPN1BQ9BZX4 212 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ROPN1Q9HAT0 212 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 MKNK2Q9HBH9 465 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 NCANO14594 1321 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 BCL9O00512 1426 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SPAG7O75391 227 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 BAG3O95817 575 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 TSPY3P0CV98 308 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 TSPY8P0CW00 308 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 FOXR2Q6PJQ5 311 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 MAIP1Q8WWC4 291 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 COA7Q96BR5 231 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SERPINB12Q96P63 405 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 LRRC27Q9C0I9 530 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 IKZF4Q9H2S9 585 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 BCAS3Q9H6U6 928 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 NKIRAS1Q9NYS0 192 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 PARP2Q9UGN5 583 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
SEMA4D-209ENST00000429836 SIGLEC16A6NMB1 481 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 PODXLO00592 558 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 MARCH6O60337 910 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 TMEM253P0C7T8 217 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 PRDX5P30044 214 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 STAT1P42224 750 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 TNNI2P48788 182 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 ACVR2BQ13705 512 aa11.88□□□□□ -0.51
SEMA4D-209ENST00000429836 RCN1Q15293 331 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms