RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 BARGINQ6ZT62 677 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 LRRC34Q8IZ02 419 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 CCDC110Q8TBZ0 833 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 MTMR9Q96QG7 549 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 RTN2O75298 545 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 PLS3P13797 630 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 SKOR1P84550 965 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 NFIAQ12857 509 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 KYNUQ16719 465 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 CFAP157Q5JU67 520 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 RINT1Q6NUQ1 792 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 SCYL2Q6P3W7 929 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 KIF2BQ8N4N8 673 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 PABPC3Q9H361 631 aaKnown RBP13.52□□□□□ -0.25
CPNE4-201ENST00000429747 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 TBX3O15119 743 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 MSH4O15457 936 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 BAG2O95816 211 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 ALCAMQ13740 583 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 PRKG1Q13976 671 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 HADHQ16836 314 aaKnown RBP13.52□□□□□ -0.25
CPNE4-201ENST00000429747 MTERF2Q49AM1 385 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
CPNE4-201ENST00000429747 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 FAM213AQ9BRX8 229 aa13.52□□□□□ -0.25
CPNE4-201ENST00000429747 MAPK7Q13164 816 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
CPNE4-201ENST00000429747 PPP2R5AQ15172 486 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TMEM119Q4V9L6 283 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 KRT39Q6A163 491 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 CFAP61Q8NHU2 1237 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 FAM167BQ9BTA0 163 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 VCXQ9H320 206 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 SLC24A3Q9HC58 644 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 HNRNPH3P31942 346 aaKnown RBP13.51□□□□□ -0.25
CPNE4-201ENST00000429747 BASP1P80723 227 aaKnown RBP13.51□□□□□ -0.25
CPNE4-201ENST00000429747 EPC2Q52LR7 807 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 LGSNQ5TDP6 509 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 EPS8L3Q8TE67 593 aaKnown RBP13.51□□□□□ -0.25
CPNE4-201ENST00000429747 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TSNARE1Q96NA8 513 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 DDX20Q9UHI6 824 aaKnown RBP13.51□□□□□ -0.25
CPNE4-201ENST00000429747 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TMEM120BA0PK00 339 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 INHBAP08476 426 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 MTMR1Q13613 665 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 SPARCL1Q14515 664 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 EPHA7Q15375 998 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 SHISA4Q96DD7 197 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 VCPKMTQ9H867 229 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 TUFT1Q9NNX1 390 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
CPNE4-201ENST00000429747 AGPSO00116 658 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 MAPK13O15264 365 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 P4HBP07237 508 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SCP2P22307 547 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 MSH2P43246 934 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 QARSP47897 775 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 RCN2Q14257 317 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 INTUQ9ULD6 942 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 DDX3XO00571 662 aaKnown RBP eCLIP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 FGRP09769 529 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CASP5P51878 434 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 TMEM270Q6UE05 265 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 PAF1Q8N7H5 531 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SNF8Q96H20 258 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 DCTN4Q9UJW0 460 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 F8VZ95 297 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 H7C0C1 242 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 NPR1P16066 1061 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 RFX1P22670 979 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 FECHP22830 423 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 ELF1P32519 619 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SCTRP47872 440 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 ATP5OP48047 213 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CCHCR1Q8TD31 782 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 A0A0G2JND7 137 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CFAP73A6NFT4 308 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 ARHGAP42A6NI28 874 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 TXNDC9O14530 226 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 RNF8O76064 485 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 LUC7L3O95232 432 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SARNPP82979 210 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 KCNA1Q09470 495 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 RASA3Q14644 834 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms