RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PANK4Q9NVE7 773 aa16.47■□□□□ 0.23
GARNL3-204ENST00000429629 CXXC1Q9P0U4 656 aaPredicted RBP16.47■□□□□ 0.23
GARNL3-204ENST00000429629 HOOK1Q9UJC3 728 aaKnown RBP16.47■□□□□ 0.23
GARNL3-204ENST00000429629 ADGRA3Q8IWK6 1321 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 RANBP2P49792 3224 aaKnown RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 MGEA5O60502 916 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 PRKCBP05771 671 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 STAG3L1P0CL83 205 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 SARSP49591 514 aaKnown RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 RAB27AP51159 221 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 SMAD3P84022 425 aaKnown RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 EHHADHQ08426 723 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 PSMD2Q13200 908 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 HERC4Q5GLZ8 1057 aaPredicted RBP16.46■□□□□ 0.23
GARNL3-204ENST00000429629 ZPBP2Q6X784 338 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 HAUS6Q7Z4H7 955 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 NPAS4Q8IUM7 802 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 LINC01599Q8WXQ3 324 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 PCDHB13Q9Y5F0 798 aa16.46■□□□□ 0.23
GARNL3-204ENST00000429629 ZBBXA8MT70 800 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 SLC16A4O15374 487 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 PPP1R37O75864 691 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 PIGRP01833 764 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 IDEP14735 1019 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 ATP2A2P16615 1042 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 ARF4P18085 180 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 FGFR4P22455 802 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 CACNB1Q02641 598 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 STRN3Q13033 797 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 PRPF4BQ13523 1007 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 STXBP4Q6ZWJ1 553 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 MRPL10Q7Z7H8 261 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 STAMQ92783 540 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 GTPBP4Q9BZE4 634 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 TMEM161AQ9NX61 479 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 PCDH10Q9P2E7 1040 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
GARNL3-204ENST00000429629 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
GARNL3-204ENST00000429629 N4BP3O15049 544 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 GJB5O95377 273 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 AFMP43652 599 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 ASIC1P78348 528 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 HTRA4P83105 476 aaPredicted RBP16.44■□□□□ 0.22
GARNL3-204ENST00000429629 CUL4BQ13620 913 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 TAS1R3Q7RTX0 852 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 ZNF598Q86UK7 904 aaKnown RBP16.44■□□□□ 0.22
GARNL3-204ENST00000429629 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 ECHDC2Q86YB7 292 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 HERC6Q8IVU3 1022 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 SPATA20Q8TB22 786 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 RAD9AQ99638 391 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 ACO2Q99798 780 aaKnown RBP16.44■□□□□ 0.22
GARNL3-204ENST00000429629 ZHX3Q9H4I2 956 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
GARNL3-204ENST00000429629 PTPRHQ9HD43 1115 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 LMBRD1Q9NUN5 540 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 TBX20Q9UMR3 447 aa16.44■□□□□ 0.22
GARNL3-204ENST00000429629 HOXA2O43364 376 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 KLRC4O43908 158 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
GARNL3-204ENST00000429629 NR1I2O75469 434 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 LIG1P18858 919 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 DPYDQ12882 1025 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 COASYQ13057 564 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 KCNB1Q14721 858 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 POSTNQ15063 836 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 UBXN11Q5T124 520 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 TWF2Q6IBS0 349 aaKnown RBP16.43■□□□□ 0.22
GARNL3-204ENST00000429629 MAP4K3Q8IVH8 894 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 CCDC47Q96A33 483 aaKnown RBP16.43■□□□□ 0.22
GARNL3-204ENST00000429629 PGBD4Q96DM1 585 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 UBN1Q9NPG3 1134 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 FAM105AQ9NUU6 356 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 INSL6Q9Y581 213 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 PCDHB7Q9Y5E2 793 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 PCDHA11Q9Y5I1 949 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 LOXHD1Q8IVV2 1947 aa16.43■□□□□ 0.22
GARNL3-204ENST00000429629 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 EIF3DO15371 548 aaKnown RBP eCLIP16.42■□□□□ 0.22
GARNL3-204ENST00000429629 B4GALT5O43286 388 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 TOM1L1O75674 476 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 RHOBTB3O94955 611 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 PROZP22891 400 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 SNRPFP62306 86 aaKnown RBP16.42■□□□□ 0.22
GARNL3-204ENST00000429629 DEFB103AP81534 67 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 RAB30Q15771 203 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 FAM26FQ5R3K3 315 aa16.42■□□□□ 0.22
GARNL3-204ENST00000429629 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms