RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 FAM160A1Q05DH4 1040 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 SNW1Q13573 536 aaKnown RBP24.59■■□□□ 1.53
PTPN18-205ENST00000428843 LRIT3Q3SXY7 679 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 SLC24A5Q71RS6 500 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 TAS1R3Q7RTX0 852 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 CCDC65Q8IXS2 484 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 CNNM3Q8NE01 707 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 PRIMPOLQ96LW4 560 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 FIZ1Q96SL8 496 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 GBF1Q92538 1859 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-205ENST00000428843 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.58■■□□□ 1.53
PTPN18-205ENST00000428843 EDN1P05305 212 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 SARSP49591 514 aaKnown RBP24.58■■□□□ 1.53
PTPN18-205ENST00000428843 UBE2HP62256 183 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 NCBP1Q09161 790 aaKnown RBP24.58■■□□□ 1.53
PTPN18-205ENST00000428843 CUL4BQ13620 913 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 TWF2Q6IBS0 349 aaKnown RBP24.58■■□□□ 1.53
PTPN18-205ENST00000428843 HAUS6Q7Z4H7 955 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 HERC6Q8IVU3 1022 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 FAM178BQ8IXR5 827 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 TOP1MTQ969P6 601 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 GBP4Q96PP9 640 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 DACT1Q9NYF0 836 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 SEL1LQ9UBV2 794 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 USP20Q9Y2K6 914 aa24.58■■□□□ 1.53
PTPN18-205ENST00000428843 TTLL13PA6NNM8 815 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 H0YCG3 227 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 K7ENM7 598 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 ACKR2O00590 384 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 UPP2O95045 317 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 MAPTP10636 758 aaKnown RBP24.57■■□□□ 1.52
PTPN18-205ENST00000428843 IBSPP21815 317 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-205ENST00000428843 NMT1P30419 496 aaKnown RBP24.57■■□□□ 1.52
PTPN18-205ENST00000428843 PRPF4BQ13523 1007 aaKnown RBP24.57■■□□□ 1.52
PTPN18-205ENST00000428843 HERC4Q5GLZ8 1057 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-205ENST00000428843 FAM117BQ6P1L5 589 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 CNTNAP2Q9UHC6 1331 aa24.57■■□□□ 1.52
PTPN18-205ENST00000428843 NR1I2O75469 434 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 RABGGTBP53611 331 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 FAM189BP81408 668 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 COASYQ13057 564 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 NOTUMQ6P988 496 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 NPAS4Q8IUM7 802 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 TRAIPQ9BWF2 469 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 TBC1D7Q9P0N9 293 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 TRIOBPQ9H2D6 2365 aa24.56■■□□□ 1.52
PTPN18-205ENST00000428843 GTPBP6O43824 516 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-205ENST00000428843 GJB5O95377 273 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 PRR29P0C7W0 189 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 STRN3Q13033 797 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 HABP4Q5JVS0 413 aaKnown RBP24.55■■□□□ 1.52
PTPN18-205ENST00000428843 UBXN11Q5T124 520 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 NT5DC1Q5TFE4 455 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 UNC13DQ70J99 1090 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 CDR2LQ86X02 465 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-205ENST00000428843 ECHDC2Q86YB7 292 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 CRIPAKQ8N1N5 446 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 KCNN1Q92952 543 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 CCDC51Q96ER9 411 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 MRPL44Q9H9J2 332 aaKnown RBP24.55■■□□□ 1.52
PTPN18-205ENST00000428843 FAM105AQ9NUU6 356 aa24.55■■□□□ 1.52
PTPN18-205ENST00000428843 A0A0U1RQF3 1178 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 A0A1B0GUA9 196 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 MYL1P05976 194 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 STAG3L1P0CL83 205 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 SMAD3P84022 425 aaKnown RBP24.54■■□□□ 1.52
PTPN18-205ENST00000428843 TMEM132AQ24JP5 1023 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 ZNF720Q7Z2F6 126 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 SLC17A8Q8NDX2 589 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 ZBED2Q9BTP6 218 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 EIF2AQ9BY44 585 aaKnown RBP24.54■■□□□ 1.52
PTPN18-205ENST00000428843 MRPL4Q9BYD3 311 aaKnown RBP24.54■■□□□ 1.52
PTPN18-205ENST00000428843 ST6GALNAC4Q9H4F1 302 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 OLFML3Q9NRN5 406 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 LRFN2Q9ULH4 789 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 PCDHB7Q9Y5E2 793 aa24.54■■□□□ 1.52
PTPN18-205ENST00000428843 PVALEFA0A1B0GWK0 134 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 N4BP3O15049 544 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 SCP2P22307 547 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 GTF2BQ00403 316 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 ZC2HC1CQ53FD0 456 aaPredicted RBP24.53■■□□□ 1.52
PTPN18-205ENST00000428843 KANK3Q6NY19 840 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 ACO2Q99798 780 aaKnown RBP24.53■■□□□ 1.52
PTPN18-205ENST00000428843 PDZD7Q9H5P4 517 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 ELAC1Q9H777 363 aaKnown RBP24.53■■□□□ 1.52
PTPN18-205ENST00000428843 TMEM161AQ9NX61 479 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 TBX20Q9UMR3 447 aa24.53■■□□□ 1.52
PTPN18-205ENST00000428843 SOX1O00570 391 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-205ENST00000428843 TLL1O43897 1013 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 KLRC4O43908 158 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 SKIP12755 728 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 ATF7P17544 494 aaPredicted RBP24.52■■□□□ 1.52
PTPN18-205ENST00000428843 PBX2P40425 430 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 RAB27AP51159 221 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 ATF7IP2Q5U623 682 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 EEF1DP3Q658K8 133 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 SLC27A1Q6PCB7 646 aa24.52■■□□□ 1.52
PTPN18-205ENST00000428843 ZNF598Q86UK7 904 aaKnown RBP24.52■■□□□ 1.52
PTPN18-205ENST00000428843 HPS3Q969F9 1004 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms