RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 DDB1Q16531 1140 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 ATP13A4Q4VNC1 1196 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 KRT40Q6A162 431 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 XYLT1Q86Y38 959 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 CDYL2Q8N8U2 506 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 LARP4BQ92615 738 aaKnown RBP4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 MIEF2Q96C03 454 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 HIST1H2AHQ96KK5 128 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 UIMC1Q96RL1 719 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 MPHOSPH9Q99550 1183 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 MNTQ99583 582 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 HIST1H2AJQ99878 128 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 MRIQ9BWK5 157 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 C14orf93Q9H972 538 aaKnown RBP4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 RCAN3Q9UKA8 241 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 MAPRE3Q9UPY8 281 aa4.85□□□□□ -1.63
TIMM9P3-201ENST00000428659 ZMYM3Q14202 1370 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 HOXA3O43365 443 aaPredicted RBP4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 RPS6KA4O75676 772 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 ZNF202O95125 648 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 CANXP27824 592 aaKnown RBP4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 GDF5P43026 501 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 PPARAQ07869 468 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 SPIDRQ14159 915 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 FRMD7Q6ZUT3 714 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 TAS1R1Q7RTX1 841 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 RASSF3Q86WH2 238 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 PASD1Q8IV76 773 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 THEMISQ8N1K5 641 aaPredicted RBP4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 FERMT2Q96AC1 680 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 GPR87Q9BY21 358 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 KCTD10Q9H3F6 313 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 ZNF768Q9H5H4 540 aaKnown RBP4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 MSL2Q9HCI7 577 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 NUMBLQ9Y6R0 609 aa4.84□□□□□ -1.63
TIMM9P3-201ENST00000428659 MTSS1O43312 755 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 FSBPO95073 299 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 EYA4O95677 639 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 LGALS4P56470 323 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 SART3Q15020 963 aaKnown RBP4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 DHCR24Q15392 516 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 SDE2Q6IQ49 451 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 HTR3DQ70Z44 454 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 UNC5BQ8IZJ1 945 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 MDGA1Q8NFP4 955 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 TGFBRAP1Q8WUH2 860 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 USP36Q9P275 1121 aaKnown RBP4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 SRRDQ9UH36 339 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 TRPS1Q9UHF7 1281 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 SYNPO2Q9UMS6 1093 aa4.83□□□□□ -1.64
TIMM9P3-201ENST00000428659 CYR61O00622 381 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 HMGA2P52926 109 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 NPEPPSP55786 919 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 CCT2P78371 535 aaKnown RBP4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 FAM189BP81408 668 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 HHEXQ03014 270 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 CRHR2Q13324 411 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 MRPL49Q13405 166 aaKnown RBP4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 TUBA3CQ13748 450 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 TUBA3EQ6PEY2 450 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 DDX46Q7L014 1031 aaKnown RBP4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 AFAP1L2Q8N4X5 818 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 OR5M3Q8NGP4 307 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 TEX101Q9BY14 249 aa4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 NOC2LQ9Y3T9 749 aaKnown RBP4.82□□□□□ -1.64
TIMM9P3-201ENST00000428659 AHRRA9YTQ3 701 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 LEFTY2O00292 366 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 ADCY6O43306 1168 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 IGSF3O75054 1194 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 MAN2A2P49641 1150 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 FHL2Q14192 279 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 HDGFL2Q7Z4V5 671 aaPredicted RBP4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 SYT12Q8IV01 421 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 GSPT2Q8IYD1 628 aaKnown RBP4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 ANKRD35Q8N283 1001 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 TSPEARQ8WU66 669 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 NEU4Q8WWR8 484 aaPredicted RBP4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 USP7Q93009 1102 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 CLIP3Q96DZ5 547 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 CEP95Q96GE4 821 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 IKZF4Q9H2S9 585 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 IFT22Q9H7X7 185 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 CDY2AQ9Y6F7 541 aa4.81□□□□□ -1.64
TIMM9P3-201ENST00000428659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 CTSSP25774 331 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 HSD3B2P26439 372 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 CDK17Q00537 523 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 OCRLQ01968 901 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 CNGB1Q14028 1251 aaPredicted RBP4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 MAN2A1Q16706 1144 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 BTNL9Q6UXG8 535 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 LDLRAD3Q86YD5 345 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 REPS2Q8NFH8 660 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 FBXO18Q8NFZ0 1043 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 COG1Q8WTW3 980 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 LMBR1Q8WVP7 490 aa4.8□□□□□ -1.64
TIMM9P3-201ENST00000428659 ST8SIA2Q92186 375 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms