RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 ERLIN2O94905 339 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 ALDH7A1P49419 539 aaKnown RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 AFF1P51825 1210 aaKnown RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 ZP2Q05996 745 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 COASYQ13057 564 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 KCNC3Q14003 757 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 AMHR2Q16671 573 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 SMRP1Q8NCR6 262 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 SMG8Q8ND04 991 aaKnown RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 CCDC43Q96MW1 224 aaKnown RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
TSPO-204ENST00000428336 POLR3FQ9H1D9 316 aaPredicted RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
TSPO-204ENST00000428336 PLXNA4Q9HCM2 1894 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 B4GALT3O60512 393 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 ZC3H11AO75152 810 aaKnown RBP eCLIP17.12■□□□□ 0.33
TSPO-204ENST00000428336 GALTP07902 379 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
TSPO-204ENST00000428336 AXLP30530 894 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
TSPO-204ENST00000428336 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
TSPO-204ENST00000428336 ECM1Q16610 540 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 MAEAQ7L5Y9 396 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 ZNF280BQ86YH2 543 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 ADHFE1Q8IWW8 467 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 ERMNQ8TAM6 284 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 CPB2Q96IY4 423 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 C1QTNF1Q9BXJ1 281 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 EIF2AQ9BY44 585 aaKnown RBP17.12■□□□□ 0.33
TSPO-204ENST00000428336 RSAD1Q9HA92 442 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
TSPO-204ENST00000428336 PI4K2BG5E9Z4 385 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
TSPO-204ENST00000428336 MUTP22033 750 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 PTGDRQ13258 359 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 NOTUMQ6P988 496 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 TMEM184AQ6ZMB5 413 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 TMC7Q7Z402 723 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
TSPO-204ENST00000428336 CNNM3Q8NE01 707 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
TSPO-204ENST00000428336 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 IGSF21Q96ID5 467 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 IPPQ9Y573 584 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 CNTNAP2Q9UHC6 1331 aa17.11■□□□□ 0.33
TSPO-204ENST00000428336 FSD2A1L4K1 749 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 C2orf71A6NGG8 1288 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 B4GALT5O43286 388 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 DDHD2O94830 711 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 CYP11B2P19099 503 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 SLC11A1P49279 550 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
TSPO-204ENST00000428336 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
TSPO-204ENST00000428336 DDX53Q86TM3 631 aaKnown RBP17.1■□□□□ 0.33
TSPO-204ENST00000428336 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
TSPO-204ENST00000428336 LRRIQ4A6NIV6 560 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 INPPL1O15357 1258 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 ITGA4P13612 1032 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 GJB2P29033 226 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 CCT6AP40227 531 aaKnown RBP17.09■□□□□ 0.33
TSPO-204ENST00000428336 NCBP1Q09161 790 aaKnown RBP17.09■□□□□ 0.33
TSPO-204ENST00000428336 PDIA5Q14554 519 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 IL17AQ16552 155 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 HAUS3Q68CZ6 603 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 CDCA2Q69YH5 1023 aaPredicted RBP17.09■□□□□ 0.33
TSPO-204ENST00000428336 VPS52Q8N1B4 723 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 GBP3Q9H0R5 595 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 ZBP1Q9H171 429 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
TSPO-204ENST00000428336 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
TSPO-204ENST00000428336 HES2Q9Y543 173 aa17.09■□□□□ 0.33
TSPO-204ENST00000428336 A0A1B0GUA9 196 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 CXCL14O95715 111 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 POMCP01189 267 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 COL9A1P20849 921 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 MCM2P49736 904 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 ANKRD54Q6NXT1 300 aa17.08■□□□□ 0.32
TSPO-204ENST00000428336 SYCE2Q6PIF2 218 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms