RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
CNTN4-206ENST00000427741 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 MEIS2O14770 477 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 GBP1P32455 592 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 HADHBP55084 474 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 BNIP1Q12981 228 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 GRAPQ13588 217 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 SLMAPQ14BN4 828 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 QRICH1Q2TAL8 776 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ZNF568Q3ZCX4 644 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ZC2HC1CQ53FD0 456 aaPredicted RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 C15orf52Q6ZUT6 534 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ERICH1Q86X53 443 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ZSWIM1Q9BR11 485 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 TBCAO75347 108 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 KRT16P08779 473 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 HSPA6P17066 643 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 NMT1P30419 496 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 PEX5P50542 639 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ARHGAP4P98171 946 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 LONRF1Q17RB8 773 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 MFSD14BQ5SR56 506 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 C11orf63Q6NUN7 778 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 SLC20A1Q8WUM9 679 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 OLFML3Q9NRN5 406 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 USP40Q9NVE5 1235 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 NOP53Q9NZM5 478 aaKnown RBP16.06■□□□□ 0.16
CNTN4-206ENST00000427741 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 PCDHA1Q9Y5I3 950 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 PFASO15067 1338 aa16.06■□□□□ 0.16
CNTN4-206ENST00000427741 MIF4GDA9UHW6 222 aaKnown RBP16.05■□□□□ 0.16
CNTN4-206ENST00000427741 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 ZNF131P52739 623 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 COPS2P61201 443 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 KIF22Q14807 665 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 MOXD1Q6UVY6 613 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 RHOT2Q8IXI1 618 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 DDX23Q9BUQ8 820 aaKnown RBP16.05■□□□□ 0.16
CNTN4-206ENST00000427741 CHORDC1Q9UHD1 332 aaPredicted RBP16.05■□□□□ 0.16
CNTN4-206ENST00000427741 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 FAM86B1E9PN63 330 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 FOXN3O00409 490 aaPredicted RBP16.05■□□□□ 0.16
CNTN4-206ENST00000427741 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 GPSM2P81274 684 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 VSTM1Q6UX27 236 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 UBL4BQ8N7F7 174 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 YIPF3Q9GZM5 350 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 CTTNBP2NLQ9P2B4 639 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 TMEM120BA0PK00 339 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 LRRN2O75325 713 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 PYGMP11217 842 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 CCDC25Q86WR0 208 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 ZNF483Q8TF39 744 aaPredicted RBP16.05■□□□□ 0.16
CNTN4-206ENST00000427741 DYDC1Q8WWB3 177 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 BATF3Q9NR55 127 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
CNTN4-206ENST00000427741 TP73O15350 636 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 IL1R1P14778 569 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 Q4G0T1 1027 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 FITM2Q8N6M3 262 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 KLHL29Q96CT2 875 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 DAGLAQ9Y4D2 1042 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 SUN1O94901 812 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 GJB6O95452 261 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 FTLP02792 175 aaPredicted RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 COMTP21964 271 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 CCND1P24385 295 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 COILP38432 576 aaPredicted RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 KCNJ1P48048 391 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 CYP1B1Q16678 543 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 NUGGCQ68CJ6 796 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 RINT1Q6NUQ1 792 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
CNTN4-206ENST00000427741 ZBTB10Q96DT7 871 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 VAV3Q9UKW4 847 aa16.04■□□□□ 0.16
CNTN4-206ENST00000427741 TBX3O15119 743 aa16.03■□□□□ 0.16
CNTN4-206ENST00000427741 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
CNTN4-206ENST00000427741 SHMT1P34896 483 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms