RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 HELQQ8TDG4 1101 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LPPQ93052 612 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 HLA-CQ95604 372 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ASB2Q96Q27 587 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NACC1Q96RE7 527 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RAB34Q9BZG1 259 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LMAN2LQ9H0V9 348 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NSUN3Q9H649 340 aaKnown RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 AAASQ9NRG9 546 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FAM105AQ9NUU6 356 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PLAGL2Q9UPG8 496 aa10.24□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PRRC2BQ5JSZ5 2229 aaKnown RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KAT6AQ92794 2004 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LRRIQ4A6NIV6 560 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LAD1O00515 517 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ASAP2O43150 1006 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LAG3P18627 525 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ARL2P36404 184 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PBX3P40426 434 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PRPHP41219 470 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 RAB27AP51159 221 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KCNQ1P51787 676 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PTENP60484 403 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ATP2C1P98194 919 aaPredicted RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ZRSR1Q15695 479 aaKnown RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 IL17AQ16552 155 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 AAK1Q2M2I8 961 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PADI6Q6TGC4 694 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DTHD1Q6ZMT9 781 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 THNSL1Q8IYQ7 743 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 COLGALT1Q8NBJ5 622 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MCPH1Q8NEM0 835 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CASD1Q96PB1 797 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 BHMT2Q9H2M3 363 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 UBE2ZQ9H832 354 aaPredicted RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DDX19AQ9NUU7 478 aaKnown RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DBR1Q9UK59 544 aaKnown RBP10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 COG5Q9UP83 839 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 INPP5FQ9Y2H2 1132 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
RFX3-AS1-202ENST00000427722 VWA3AA6NCI4 1184 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MEIS3P2A8K0S8 358 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SMAPO00193 183 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TSPAN1O60635 241 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 FGF18O76093 207 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 EOMESO95936 686 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SKIP12755 728 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 XRCC6P12956 609 aaKnown RBP eCLIP10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KCNA5P22460 613 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CDC25AP30304 524 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MBTD1Q05BQ5 628 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ECM1Q16610 540 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KRT79Q5XKE5 535 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 GLB1LQ6UWU2 654 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 LRRC55Q6ZSA7 311 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 IGSF22Q8N9C0 903 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TATDN2Q93075 761 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 P2RX5Q93086 422 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CPB2Q96IY4 423 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ZNF558Q96NG5 402 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MRPL9Q9BYD2 267 aaKnown RBP10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CWH43Q9H720 699 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PCDHB2Q9Y5E7 798 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PCDHGC5Q9Y5F6 944 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 UNC80Q8N2C7 3258 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 TTC3P53804 2025 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MYO9BQ13459 2157 aa10.22□□□□□ -0.77
RFX3-AS1-202ENST00000427722 A0A0C4DFX4 3053 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 K7ELQ4 463 aaPredicted RBP10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 B4GALT5O43286 388 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CYP11B2P19099 503 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 PDCP20941 246 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 MUTP22033 750 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DNAJB1P25685 340 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 HOXA11P31270 313 aaPredicted RBP10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 IRS1P35568 1242 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CAMK1Q14012 370 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NAALADL2Q58DX5 795 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NOTUMQ6P988 496 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 KCNT2Q6UVM3 1135 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 DEPTORQ8TB45 409 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SPPL3Q8TCT6 385 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 POF1BQ8WVV4 589 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 BSNDQ8WZ55 320 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 CCDC51Q96ER9 411 aa10.21□□□□□ -0.77
RFX3-AS1-202ENST00000427722 NECAB3Q96P71 396 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms