RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
FIRRE-201ENST00000427391 PBKQ96KB5 322 aa12.59□□□□□ -0.39
FIRRE-201ENST00000427391 KCND2Q9NZV8 630 aa12.59□□□□□ -0.39
FIRRE-201ENST00000427391 BCRP11274 1271 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 LMNB1P20700 586 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 ADSSP30520 456 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 PDCLQ13371 301 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 NNTQ13423 1086 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 BAATQ14032 418 aaPredicted RBP12.58□□□□□ -0.39
FIRRE-201ENST00000427391 CIAPIN1Q6FI81 312 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 BSNDQ8WZ55 320 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 SEMA4DQ92854 862 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 HES6Q96HZ4 224 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 ACCSQ96QU6 501 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 PCDHB18PQ96TA0 734 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 PDCD2LQ9BRP1 358 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 CENPHQ9H3R5 247 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 SUCLA2Q9P2R7 463 aaPredicted RBP12.58□□□□□ -0.39
FIRRE-201ENST00000427391 AMFRQ9UKV5 643 aa12.58□□□□□ -0.39
FIRRE-201ENST00000427391 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 PEX10O60683 326 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 IRAK1P51617 712 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 TNIP1Q15025 636 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 AGPAT1Q99943 283 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 TMEM117Q9H0C3 514 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 TAF1DQ9H5J8 278 aaPredicted RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 UBE4BO95155 1302 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 DDX3YO15523 660 aaKnown RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 MUTP22033 750 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 GNGT1P63211 74 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 PPATQ06203 517 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 ANO5Q75V66 913 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 MAATS1Q7Z4T9 603 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 SLC9A9Q8IVB4 645 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 PPM1KQ8N3J5 372 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 XXYLT1Q8NBI6 393 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 RUBCNQ92622 972 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 KRT35Q92764 455 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 PLAAQ9Y263 795 aa12.58□□□□□ -0.4
FIRRE-201ENST00000427391 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
FIRRE-201ENST00000427391 FER1L6Q2WGJ9 1857 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 A0A0A6YYK5 440 aaPredicted RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 CYP26A1O43174 497 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 UAP1Q16222 522 aaPredicted RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 ARHGEF16Q5VV41 709 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 ALS2CLQ60I27 953 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 RNF207Q6ZRF8 634 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 DHX38Q92620 1227 aaKnown RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 KREMEN1Q96MU8 473 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 DEFB129Q9H1M3 183 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 OPA1O60313 960 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 MXI1P50539 228 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 KIF22Q14807 665 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 EPC2Q52LR7 807 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 LMBR1Q8WVP7 490 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 GLG1Q92896 1179 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 PXMP2Q9NR77 195 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 CTTNBP2NLQ9P2B4 639 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
FIRRE-201ENST00000427391 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 NCANO14594 1321 aa12.57□□□□□ -0.4
FIRRE-201ENST00000427391 GOLGA8KD6RF30 607 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 ZNF862O60290 1169 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 NPTX2P47972 431 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 PPFIA1Q13136 1202 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 CEP85LQ5SZL2 805 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 LMBRD2Q68DH5 695 aaPredicted RBP12.56□□□□□ -0.4
FIRRE-201ENST00000427391 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
FIRRE-201ENST00000427391 PI4K2AQ9BTU6 479 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 ISCUQ9H1K1 167 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 RNF146Q9NTX7 359 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 DBR1Q9UK59 544 aaKnown RBP12.56□□□□□ -0.4
FIRRE-201ENST00000427391 GRIN2DO15399 1336 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 ADGRA3Q8IWK6 1321 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 CHRNB2P17787 502 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 HSD17B3P37058 310 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 GTF2BQ00403 316 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 PHLDB2Q86SQ0 1253 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 RASGEF1CQ8N431 466 aa12.56□□□□□ -0.4
FIRRE-201ENST00000427391 TMEM206Q9H813 350 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms