RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 KRT13P13646 458 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 ADSSP30520 456 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 PHKA2P46019 1235 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 POU5F1BQ06416 359 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 TBX2Q13207 712 aaPredicted RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 TRIM14Q14142 442 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 SYCP1Q15431 976 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 SLFN12LQ6IEE8 588 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 LINC01465Q8N7H1 131 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 TSKSQ9UJT2 592 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 MAPK13O15264 365 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
GINS3-203ENST00000426538 PTENP60484 403 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 NKX3-2P78367 333 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 CPLX3Q8WVH0 158 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 BORCS6Q96GS4 357 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 MRPL4Q9BYD3 311 aaKnown RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 NFKBIZQ9BYH8 718 aa16.5■□□□□ 0.23
GINS3-203ENST00000426538 DDX20Q9UHI6 824 aaKnown RBP16.5■□□□□ 0.23
GINS3-203ENST00000426538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
GINS3-203ENST00000426538 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 INO80B-WBP1J3KQ70 363 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 ADAMTS4O75173 837 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 PIGRP01833 764 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 VTNP04004 478 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 PRKCBP05771 671 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 TRIM21P19474 475 aaKnown RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 GRK4P32298 578 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 RBL2Q08999 1139 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 ARID5BQ14865 1188 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 SLC39A4Q6P5W5 647 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 ZPBP2Q6X784 338 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 KIAA0319LQ8IZA0 1049 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 PCSK9Q8NBP7 692 aaKnown RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 CACTINQ8WUQ7 758 aaKnown RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 NLRP7Q8WX94 980 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 TARS2Q9BW92 718 aaKnown RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 INO80BQ9C086 356 aaPredicted RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 KIAA1586Q9HCI6 787 aa16.49■□□□□ 0.23
GINS3-203ENST00000426538 HMX1Q9NP08 348 aaPredicted RBP16.49■□□□□ 0.23
GINS3-203ENST00000426538 A0A087WZ62 844 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 MSCO60682 206 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 CYP2C9P11712 490 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 MSNP26038 577 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 BFSP1Q12934 665 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 RNF180Q86T96 592 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 GPD1LQ8N335 351 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 FDXACB1Q9BRP7 624 aaPredicted RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 TCHPQ9BT92 498 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 CCDC113Q9H0I3 377 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 USP20Q9Y2K6 914 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 MBLAC1A4D2B0 266 aaPredicted RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 GOLGA8IPA6NC78 632 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 GOLGA8JA6NMD2 632 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 ACKR2O00590 384 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 CLDN3O15551 220 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 INHAP05111 366 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 ASGR1P07306 291 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 CASP14P31944 242 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 ADKP55263 362 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 NLRP11P59045 1033 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 KCNA10Q16322 511 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 USP37Q86T82 979 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 ZNF410Q86VK4 478 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 CNGA4Q8IV77 575 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 KLHDC9Q8NEP7 349 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 SLC35C1Q96A29 364 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 SAAL1Q96ER3 474 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 PPP1R16BQ96T49 567 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 FAM49AQ9H0Q0 323 aaPredicted RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 FZD8Q9H461 694 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
GINS3-203ENST00000426538 ZKSCAN5Q9Y2L8 839 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 STYXL1Q9Y6J8 313 aa16.48■□□□□ 0.23
GINS3-203ENST00000426538 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms