RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CYP26B1Q9NR63 512 aa14.21□□□□□ -0.13
SGCE-203ENST00000425444 PCDHA12Q9UN75 941 aa14.21□□□□□ -0.13
SGCE-203ENST00000425444 PCDHB7Q9Y5E2 793 aa14.21□□□□□ -0.13
SGCE-203ENST00000425444 WDR81Q562E7 1941 aa14.21□□□□□ -0.14
SGCE-203ENST00000425444 LOXHD1Q8IVV2 1947 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 FSCN2O14926 492 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 STBD1O95210 358 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 ZSCAN20P17040 1043 aaPredicted RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 EIF4BP23588 611 aaKnown RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 TXKP42681 527 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 DRP2Q13474 957 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 CTTNQ14247 550 aaKnown RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 SLC24A5Q71RS6 500 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 RHPN2Q8IUC4 686 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 TDRD5Q8NAT2 981 aaKnown RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 CEP170P1Q96L14 293 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 ADAMTS10Q9H324 1103 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 TTC12Q9H892 705 aaPredicted RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 ENTPD7Q9NQZ7 604 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 RGL1Q9NZL6 768 aa14.2□□□□□ -0.14
SGCE-203ENST00000425444 SUCLA2Q9P2R7 463 aaPredicted RBP14.2□□□□□ -0.14
SGCE-203ENST00000425444 IGKV6-21A0A0C4DH24 114 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 WNT7AO00755 349 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 MAFO75444 373 aaPredicted RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 DARSP14868 501 aaKnown RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 NPR3P17342 541 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 MCM7P33993 719 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 NPEPPSP55786 919 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 CDC42EP1Q00587 391 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 ITIH3Q06033 890 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 SPIRE1Q08AE8 756 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 OTUD6AQ7L8S5 288 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 TPH2Q8IWU9 490 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 C4orf19Q8IY42 314 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 ZDHHC14Q8IZN3 488 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 DCLK2Q8N568 766 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 RUBCNQ92622 972 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 NLRP4Q96MN2 994 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 TCF25Q9BQ70 676 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 EIF2AK1Q9BQI3 630 aaKnown RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 GCOM2Q9BZD3 368 aaPredicted RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 FOXP1Q9H334 677 aaPredicted RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 ZSWIM4Q9H7M6 989 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 ATP6V0A4Q9HBG4 840 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 WRAP73Q9P2S5 460 aaPredicted RBP14.19□□□□□ -0.14
SGCE-203ENST00000425444 FBXL21Q9UKT6 434 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 KIF3AQ9Y496 699 aa14.19□□□□□ -0.14
SGCE-203ENST00000425444 CACNA1IQ9P0X4 2223 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 TBKBP1A7MCY6 615 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 HIDE1A8MVS5 230 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 FGFR4P22455 802 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 SFPQP23246 707 aaKnown RBP eCLIP14.18□□□□□ -0.14
SGCE-203ENST00000425444 MTHFRP42898 656 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 XKR9Q5GH70 373 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 SIX5Q8N196 739 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 CASP10Q92851 521 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 CEP89Q96ST8 783 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 PUF60Q9UHX1 559 aaKnown RBP14.18□□□□□ -0.14
SGCE-203ENST00000425444 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
SGCE-203ENST00000425444 PPME1Q9Y570 386 aa14.18□□□□□ -0.14
SGCE-203ENST00000425444 CNOT1A5YKK6 2376 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 A0A087WZ62 844 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 C9IYK1 514 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 STK25O00506 426 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 CSDE1O75534 798 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 RFC5P40937 340 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 EMC2Q15006 297 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 TTC38Q5R3I4 469 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 COLGALT1Q8NBJ5 622 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 PSPC1Q8WXF1 523 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 RIN2Q8WYP3 895 aaPredicted RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 FDXACB1Q9BRP7 624 aaPredicted RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 INO80BQ9C086 356 aaPredicted RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 TMEM60Q9H2L4 133 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 TMEM161AQ9NX61 479 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 DBR1Q9UK59 544 aaKnown RBP14.17□□□□□ -0.14
SGCE-203ENST00000425444 COL4A3BPQ9Y5P4 624 aa14.17□□□□□ -0.14
SGCE-203ENST00000425444 FNDC1Q4ZHG4 1894 aaPredicted RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 POTEMA6NI47 508 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 HOXA2O43364 376 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 GAS2O43903 313 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 SLITRK3O94933 977 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 FGFR1P11362 822 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 ORC2Q13416 577 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms