RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MYL3P08590 195 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 KLRC1P26715 233 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 NAMPTP43490 491 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 ELF2Q15723 593 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 FSCN1Q16658 493 aaKnown RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 CCDC40Q4G0X9 1142 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 KAT2BQ92831 832 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 WDR24Q96S15 920 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 ARHGAP28Q9P2N2 729 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 CAPN11Q9UMQ6 739 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 TISP43B9A030 160 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 SEPT4O43236 478 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 GNRH1P01148 92 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 CCND3P30281 292 aaPredicted RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 KRT9P35527 623 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 PPFIA1Q13136 1202 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 TUBB2AQ13885 445 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 CAPSQ13938 189 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 DEPTORQ8TB45 409 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
CALD1-206ENST00000424922 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 TUBB2BQ9BVA1 445 aa16.39■□□□□ 0.21
CALD1-206ENST00000424922 COL1A2P08123 1366 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 EFCAB8A8MWE9 144 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 H0YCG3 227 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 GNA14O95837 355 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 F2P00734 622 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 CYP2J2P51589 502 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 CLCN3P51790 818 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 LAMTOR4Q0VGL1 99 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 GRIK4Q16099 956 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 GOLGA5Q8TBA6 731 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 PPP1R13LQ8WUF5 828 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 SUCLA2Q9P2R7 463 aaPredicted RBP16.38■□□□□ 0.21
CALD1-206ENST00000424922 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 MRFAP1Q9Y605 127 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 CEP350Q5VT06 3117 aa16.38■□□□□ 0.21
CALD1-206ENST00000424922 KIF5CO60282 957 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 TADA3O75528 432 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 AKAP3O75969 853 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 PGK1P00558 417 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 HMGCRP04035 888 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 GJB1P08034 283 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 SRGAP2CP0DJJ0 459 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 CASP4P49662 377 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MXD4Q14582 209 aaPredicted RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 NFIL3Q16649 462 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MIIPQ5JXC2 388 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 TAS1R3Q7RTX0 852 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MYO1AQ9UBC5 1043 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 MAGEB2O15479 319 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 RARBP10826 455 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 H2AFXP16104 143 aaPredicted RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 GJA9P57773 515 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MFSD10Q14728 455 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 MTHFD1LQ6UB35 978 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 SETD4Q9NVD3 440 aa16.37■□□□□ 0.21
CALD1-206ENST00000424922 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.37■□□□□ 0.21
CALD1-206ENST00000424922 V9GYY5 206 aaPredicted RBP16.37■□□□□ 0.21
CALD1-206ENST00000424922 TTC26A0AVF1 554 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 K7ERI5 159 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
CALD1-206ENST00000424922 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 MAN2A1Q16706 1144 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 ERCC6LQ2NKX8 1250 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 MARCH8Q5T0T0 291 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 RNF149Q8NC42 400 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 UBXN4Q92575 508 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 ERGIC2Q96RQ1 377 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 CBWD1Q9BRT8 395 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 PCIF1Q9H4Z3 704 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 DMAC2Q9NW81 257 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 OGFRQ9NZT2 677 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 SCN10AQ9Y5Y9 1956 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 ANKRD63C9JTQ0 380 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 SMIM10L2AP0DMW4 78 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 SMIM10L2BP0DMW5 78 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 ABCD1P33897 745 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 PSEN2P49810 448 aa16.36■□□□□ 0.21
CALD1-206ENST00000424922 PURAQ00577 322 aaKnown RBP16.36■□□□□ 0.21
CALD1-206ENST00000424922 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms