RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 CPB2Q96IY4 423 aa13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 EIF2AQ9BY44 585 aaKnown RBP13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 DHX33Q9H6R0 707 aaKnown RBP13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 HES2Q9Y543 173 aa13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 TRIP11Q15643 1979 aa13.06□□□□□ -0.32
TRBV22-1-201ENST00000424543 C2CD2LO14523 706 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 XKR9Q5GH70 373 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 CPLX2Q6PUV4 134 aaKnown RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 TAS1R1Q7RTX1 841 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 RNF149Q8NC42 400 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 PSPC1Q8WXF1 523 aaKnown RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 TRAIPQ9BWF2 469 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 KCNH6Q9H252 994 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 RSAD1Q9HA92 442 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 XPNPEP1Q9NQW7 623 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
TRBV22-1-201ENST00000424543 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 MARCH6O60337 910 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 PFKFB2O60825 505 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 FDPSP14324 419 aaKnown RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 AVPR2P30518 371 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 RAB27AP51159 221 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 AK2P54819 239 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 PTPN5P54829 565 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 EPHA7Q15375 998 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 TDRD5Q8NAT2 981 aaKnown RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 B3GALT6Q96L58 329 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 FAM20AQ96MK3 541 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 ORC3Q9UBD5 711 aaPredicted RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
TRBV22-1-201ENST00000424543 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 H0Y858 1186 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 NRP1O14786 923 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 B4GALT5O43286 388 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 TSPAN1O60635 241 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 JAK2O60674 1132 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 ZNF623O75123 536 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 SKIP12755 728 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 MLH1P40692 756 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 RFC5P40937 340 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 MTHFRP42898 656 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 ITIH3Q06033 890 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 CABP7Q86V35 215 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 RIPOR3Q96MK2 946 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 ZFP42Q96MM3 310 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 GAD1Q99259 594 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 MTRQ99707 1265 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 IPPQ9Y573 584 aa13.03□□□□□ -0.32
TRBV22-1-201ENST00000424543 CDKL5O76039 1030 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 KLRC2P26717 231 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 OR1G1P47890 313 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 SCNN1GP51170 649 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 CLCN4P51793 760 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 CDC42EP1Q00587 391 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 MTMR3Q13615 1198 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 CAPSQ13938 189 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 C4orf19Q8IY42 314 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 ST13P5Q8NFI4 369 aaPredicted RBP13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 PGBD4Q96DM1 585 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 JPH2Q9BR39 696 aaPredicted RBP13.02□□□□□ -0.33
TRBV22-1-201ENST00000424543 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms