RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 LCA5LO95447 670 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
PTPRN-204ENST00000423636 SNRNP35Q16560 246 aaKnown RBP12.92□□□□□ -0.34
PTPRN-204ENST00000423636 C1orf220Q5T0J3 134 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 METTL14Q9HCE5 456 aaKnown RBP12.92□□□□□ -0.34
PTPRN-204ENST00000423636 NOC2LQ9Y3T9 749 aaKnown RBP12.92□□□□□ -0.34
PTPRN-204ENST00000423636 UBIAD1Q9Y5Z9 338 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 ZEB2O60315 1214 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 KCNJ1P48048 391 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 CCDC70Q6NSX1 233 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 MAATS1Q7Z4T9 603 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 KIAA1683Q9H0B3 1180 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 ELP3Q9H9T3 547 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 PFASO15067 1338 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 HTTP42858 3142 aa12.92□□□□□ -0.34
PTPRN-204ENST00000423636 DAPK3O43293 454 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 CTNND1O60716 968 aaKnown RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 PLS3P13797 630 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 CYP2C19P33261 490 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 VPS41P49754 854 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 MXI1P50539 228 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 SETQ01105 290 aaPredicted RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 ORC1Q13415 861 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 BIRC3Q13489 604 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 LY6KQ17RY6 165 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 LRRC71Q8N4P6 559 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 LCMT1Q9UIC8 334 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 TNNI1P19237 187 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 PRKCEQ02156 737 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 SNX1Q13596 522 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 TNFAIP1Q13829 316 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 CTNNBL1Q8WYA6 563 aaPredicted RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 PJA2O43164 708 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 JAM2P57087 298 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 IGBP1P78318 339 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 GPS2Q13227 327 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 TRIP13Q15645 432 aaPredicted RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 NOP9Q86U38 636 aaKnown RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 ALG3Q92685 438 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 COPS5Q92905 334 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 ZBED3Q96IU2 234 aaPredicted RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 RIT2Q99578 217 aa12.91□□□□□ -0.34
PTPRN-204ENST00000423636 ZNF214Q9UL59 606 aaPredicted RBP12.91□□□□□ -0.34
PTPRN-204ENST00000423636 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 SART1O43290 800 aaKnown RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 ACTR2P61160 394 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 ERVK-9P63128 1117 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 WDR93Q6P2C0 686 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 PRUNE1Q86TP1 453 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 TAB3Q8N5C8 712 aaPredicted RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 TCHPQ9BT92 498 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 TBC1D12O60347 775 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 PSMC5P62195 406 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 MTM1Q13496 603 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 ZIM3Q96PE6 472 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 UBXN6Q9BZV1 441 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 LUC7LQ9NQ29 371 aaKnown RBP12.9□□□□□ -0.34
PTPRN-204ENST00000423636 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
PTPRN-204ENST00000423636 O00370 1275 aa12.9□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF131P52739 623 aa12.9□□□□□ -0.35
PTPRN-204ENST00000423636 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.35
PTPRN-204ENST00000423636 DPH6Q7L8W6 267 aa12.9□□□□□ -0.35
PTPRN-204ENST00000423636 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.35
PTPRN-204ENST00000423636 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.35
PTPRN-204ENST00000423636 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.35
PTPRN-204ENST00000423636 INPP4AQ96PE3 977 aaPredicted RBP12.9□□□□□ -0.35
PTPRN-204ENST00000423636 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.35
PTPRN-204ENST00000423636 EDN1P05305 212 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 PSMC4P43686 418 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 ZFYVE27Q5T4F4 411 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 TMEM161BQ8NDZ6 487 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 LMO3Q8TAP4 145 aa12.89□□□□□ -0.35
PTPRN-204ENST00000423636 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms