RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 RNF168Q8IYW5 571 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 HDAC7Q8WUI4 952 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 RIN2Q8WYP3 895 aaPredicted RBP18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 RUBCNQ92622 972 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 TCEANC2Q96MN5 208 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 MYADMQ96S97 322 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 TEKT3Q9BXF9 490 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 RXFP1Q9HBX9 757 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 CA14Q9ULX7 337 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 SIT1Q9Y3P8 196 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 CLUHO75153 1309 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 CNTNAP2Q9UHC6 1331 aa18.81■□□□□ 0.6
CHCHD3-202ENST00000423635 KLF18A0A0U1RQI7 1052 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 INPPL1O15357 1258 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 TEX28O15482 410 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 ADH1AP07327 375 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 RFX1P22670 979 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 KIAA0319Q5VV43 1072 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 ELMSAN1Q6PJG2 1045 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 B3GNT9Q6UX72 402 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 RHPN2Q8IUC4 686 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 GPR152Q8TDT2 470 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 BORCS6Q96GS4 357 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 FAM193BQ96PV7 902 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 HERC2P3Q9BVR0 1158 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 RSAD1Q9HA92 442 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 IFT122Q9HBG6 1241 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 AGPAT5Q9NUQ2 364 aa18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 SEPT9Q9UHD8 586 aaPredicted RBP18.8■□□□□ 0.6
CHCHD3-202ENST00000423635 CCDC196A0A1B0GTZ2 297 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 ANHXE9PGG2 379 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 PRPF3O43395 683 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 CHMP2AO43633 222 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 PSMD10O75832 226 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 URODP06132 367 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 DCNP07585 359 aaKnown RBP18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 LAMP2P13473 410 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 LRCH2Q5VUJ6 765 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 TAS1R1Q7RTX1 841 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 KSR1Q8IVT5 923 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 ZNF707Q96C28 371 aaPredicted RBP18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 SLC2A4RGQ9NR83 387 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 FANCMQ8IYD8 2048 aa18.79■□□□□ 0.6
CHCHD3-202ENST00000423635 TMEM150BA6NC51 233 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 C2CD2LO14523 706 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 GLUD1P00367 558 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 AK2P54819 239 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 SPECC1Q5M775 1068 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 MIER3Q7Z3K6 550 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 DCLK2Q8N568 766 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 SUMF1Q8NBK3 374 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 SMG7Q92540 1137 aaKnown RBP18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 JPH2Q9BR39 696 aaPredicted RBP18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 ARHGEF3Q9NR81 526 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 MARCH5Q9NX47 278 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
CHCHD3-202ENST00000423635 RFPL2O75678 378 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 HOXA11P31270 313 aaPredicted RBP18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 STARD6P59095 220 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 ADCK5Q3MIX3 580 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 Q4G0T1 1027 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 UBXN11Q5T124 520 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 COLGALT2Q8IYK4 626 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 GJA10Q969M2 543 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 NLRP4Q96MN2 994 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 HINFPQ9BQA5 517 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 NT5C3AQ9H0P0 336 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 UBN1Q9NPG3 1134 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 NCOR2Q9Y618 2525 aa18.77■□□□□ 0.6
CHCHD3-202ENST00000423635 CACNA1IQ9P0X4 2223 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 POMCP01189 267 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 GLULP15104 373 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 NCLP19338 710 aaKnown RBP18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 DSG1Q02413 1049 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 POTEGQ6S5H5 508 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 ANO5Q75V66 913 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 SRGAP1Q7Z6B7 1085 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 GPR65Q8IYL9 337 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 MAML2Q8IZL2 1156 aaPredicted RBP18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 CNNM3Q8NE01 707 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 CHST7Q9NS84 486 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 ZDHHC7Q9NXF8 308 aa18.76■□□□□ 0.59
CHCHD3-202ENST00000423635 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 GLUD2P49448 558 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 HTR4Q13639 388 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 ZNF528Q3MIS6 628 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 RASEFQ8IZ41 740 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 PJA1Q8NG27 643 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 PRKD2Q9BZL6 878 aa18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 ZFP37Q9Y6Q3 630 aaPredicted RBP18.75■□□□□ 0.59
CHCHD3-202ENST00000423635 CYP3A7-CYP3A51PA0A087WV96 503 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms