RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CHMP4BQ9H444 224 aaKnown RBP6.91□□□□□ -1.3
LINC00458-201ENST00000423442 NUDT5Q9UKK9 219 aa6.91□□□□□ -1.3
LINC00458-201ENST00000423442 LAMB1P07942 1786 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 RANBP2P49792 3224 aaKnown RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 SNAP23O00161 211 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 EYA2O00167 538 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 AKAP8O43823 692 aaKnown RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 GNAI2P04899 355 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 GYG1P46976 350 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 FKBP1AP62942 108 aaKnown RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 ZXDAP98168 799 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 G3BP1Q13283 466 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 PUM3Q15397 648 aaKnown RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 SLC9C1Q4G0N8 1177 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 LRRC24Q50LG9 513 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 ADAMTS17Q8TE56 1095 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 DPF3Q92784 378 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 RNF34Q969K3 372 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 KAZALD1Q96I82 304 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 WNK4Q96J92 1243 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 CLMNQ96JQ2 1002 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 FAM84BQ96KN1 310 aaPredicted RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 FGD4Q96M96 766 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 SIL1Q9H173 461 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 WHRNQ9P202 907 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
LINC00458-201ENST00000423442 PTCH2Q9Y6C5 1203 aa6.9□□□□□ -1.3
LINC00458-201ENST00000423442 ZNF646O15015 1829 aaPredicted RBP6.9□□□□□ -1.31
LINC00458-201ENST00000423442 MATN3O15232 486 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 CIAO1O76071 339 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 TRIM27P14373 513 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 ZNF76P36508 570 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 SEPHS1P49903 392 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 CHAF1AQ13111 956 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-201ENST00000423442 OS9Q13438 667 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-201ENST00000423442 GNPTABQ3T906 1256 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 SUPT20HL1Q3ZLR7 823 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 MFSD14BQ5SR56 506 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 APOBEC3FQ8IUX4 373 aaKnown RBP6.89□□□□□ -1.31
LINC00458-201ENST00000423442 ITPRIPQ8IWB1 547 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
LINC00458-201ENST00000423442 TDRD7Q8NHU6 1098 aaKnown RBP6.89□□□□□ -1.31
LINC00458-201ENST00000423442 KLHDC4Q8TBB5 520 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 SH3TC2Q8TF17 1288 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 LPIN2Q92539 896 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 C8orf49Q96NF6 230 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 NEUROD6Q96NK8 337 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 PTPN18Q99952 460 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 GORASP1Q9BQQ3 440 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 KLHL25Q9H0H3 589 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 PRO3102Q9H379 93 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 ZBED9Q6R2W3 1325 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
LINC00458-201ENST00000423442 MAST3O60307 1309 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 C8BP07358 591 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 KLRK1P26718 216 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 TNFAIP1Q13829 316 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 HEATR6Q6AI08 1181 aaKnown RBP6.88□□□□□ -1.31
LINC00458-201ENST00000423442 OTUD7BQ6GQQ9 843 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 ADAT2Q7Z6V5 191 aaKnown RBP6.88□□□□□ -1.31
LINC00458-201ENST00000423442 LINC00482Q8N8I6 264 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 WDR66Q8TBY9 1149 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 LOXL4Q96JB6 756 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 MEIS3Q99687 375 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 DEFB129Q9H1M3 183 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 TMOD2Q9NZR1 351 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
LINC00458-201ENST00000423442 ZSWIM8A7E2V4 1837 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 SSC5DA1L4H1 1573 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 FAM205AQ6ZU69 1335 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 NTRK1P04629 796 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 EPHX1P07099 455 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 CYP2C8P10632 490 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 TIMM10P62072 90 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 ARHGEF6Q15052 776 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 CPZQ66K79 652 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 SPTY2D1Q68D10 685 aaPredicted RBP6.87□□□□□ -1.31
LINC00458-201ENST00000423442 ZGPATQ8N5A5 531 aaKnown RBP6.87□□□□□ -1.31
LINC00458-201ENST00000423442 TEKT1Q969V4 418 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 HOOK2Q96ED9 719 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 MRIQ9BWK5 157 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 VEZTQ9HBM0 779 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
LINC00458-201ENST00000423442 DENND2AQ9ULE3 1009 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 SUGT1Q9Y2Z0 365 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 CUL9Q8IWT3 2517 aa6.87□□□□□ -1.31
LINC00458-201ENST00000423442 MYH13Q9UKX3 1938 aa6.86□□□□□ -1.31
LINC00458-201ENST00000423442 NPHP3-ACAD11A0A0J9YXS1 232 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms