RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 CFAP45Q9UL16 551 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 RWDD3Q9Y3V2 267 aa10.68□□□□□ -0.7
HERC3-204ENST00000422770 SRPRBQ9Y5M8 271 aaKnown RBP10.68□□□□□ -0.7
HERC3-204ENST00000422770 NPHP3-ACAD11A0A0J9YXS1 232 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 A0A0U1RQF3 1178 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 TBCAO75347 108 aaKnown RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 FAM13AO94988 1023 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 NPTXRO95502 500 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 AXLP30530 894 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 STAT6P42226 847 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 NAMPTP43490 491 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 RNASELQ05823 741 aaKnown RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 PRPF4BQ13523 1007 aaKnown RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 NFKBIBQ15653 356 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 MAPK6Q16659 721 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 CLLU1OSQ5K130 101 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 HYIQ5T013 277 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 RRAGBQ5VZM2 374 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 FAM43BQ6ZT52 329 aaPredicted RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 USP49Q70CQ1 688 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 THNSL1Q8IYQ7 743 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 LRRC43Q8N309 656 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 PDILTQ8N807 584 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 URGCPQ8TCY9 931 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 LARP4BQ92615 738 aaKnown RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 RAD54LQ92698 747 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 ZNF689Q96CS4 500 aaPredicted RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 PGBD4Q96DM1 585 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 TMEM117Q9H0C3 514 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 AAASQ9NRG9 546 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 PRMT7Q9NVM4 692 aaPredicted RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 PCDHB2Q9Y5E7 798 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 PCDHB12Q9Y5F1 795 aa10.67□□□□□ -0.7
HERC3-204ENST00000422770 LAMA2P24043 3122 aaKnown RBP10.67□□□□□ -0.7
HERC3-204ENST00000422770 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 SLC16A4O15374 487 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 SLC26A4O43511 780 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 PRPF40AO75400 957 aaKnown RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 EOMESO95936 686 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 ITGA4P13612 1032 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 ARF4P18085 180 aaPredicted RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 CA8P35219 290 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 BMPR1AP36894 532 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 MATR3P43243 847 aaKnown RBP eCLIP10.66□□□□□ -0.7
HERC3-204ENST00000422770 SLC12A3P55017 1021 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 FAM189BP81408 668 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 PCBP1Q15365 356 aaKnown RBP eCLIP10.66□□□□□ -0.7
HERC3-204ENST00000422770 PTPROQ16827 1216 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 CLEC17AQ6ZS10 378 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 EP400NLQ6ZTU2 488 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 C1orf186Q6ZWK4 172 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 HACE1Q8IYU2 909 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 SYT2Q8N9I0 419 aaPredicted RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 FAM193BQ96PV7 902 aaPredicted RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 ADPGKQ9BRR6 497 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 EIF2AQ9BY44 585 aaKnown RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 NFKBIZQ9BYH8 718 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 RC3H2Q9HBD1 1191 aaKnown RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 ALG13Q9NP73 1137 aaKnown RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 TYW1Q9NV66 732 aaKnown RBP10.66□□□□□ -0.7
HERC3-204ENST00000422770 PARP2Q9UGN5 583 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 USP20Q9Y2K6 914 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 HES2Q9Y543 173 aa10.66□□□□□ -0.7
HERC3-204ENST00000422770 PHLPP2Q6ZVD8 1323 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 TRIP11Q15643 1979 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 MEIS3P2A8K0S8 358 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 H3BNC9 293 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 K7ERI5 159 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 DLL1O00548 723 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 N4BP3O15049 544 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.7
HERC3-204ENST00000422770 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 ATF7P17544 494 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 LAG3P18627 525 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 GUCY2CP25092 1073 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 HOXA11P31270 313 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 PBX3P40426 434 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 NPTX2P47972 431 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 EFNA5P52803 228 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 SMTNP53814 917 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 POU5F1BQ06416 359 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 STRN3Q13033 797 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 CDCA2Q69YH5 1023 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 SLC27A1Q6PCB7 646 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 DYMQ7RTS9 669 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
HERC3-204ENST00000422770 CRIPAKQ8N1N5 446 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 MYCT1Q8N699 235 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 CCDC51Q96ER9 411 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 BICD1Q96G01 975 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 ZNF558Q96NG5 402 aa10.65□□□□□ -0.7
HERC3-204ENST00000422770 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms