RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 ULK1O75385 1050 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 SLPIP03973 132 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 VIL1P09327 827 aaKnown RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 XPAP23025 273 aaPredicted RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 WNT3AP56704 352 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 NRG3P56975 720 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 DGCR2P98153 550 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 MEF2AQ02078 507 aaPredicted RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 TRIM25Q14258 630 aaKnown RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 PDCD1Q15116 288 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 LSM12Q3MHD2 195 aaKnown RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 C19orf54Q5BKX5 351 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 PITRM1Q5JRX3 1037 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 C1QL3Q5VWW1 255 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 USP51Q70EK9 711 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 APBB1IPQ7Z5R6 666 aaPredicted RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 AFAP1L2Q8N4X5 818 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 CLRN3Q8NCR9 226 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 OR14C36Q8NHC7 312 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 PLEKHG4BQ96PX9 1271 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 ANO3Q9BYT9 981 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 PCED1AQ9H1Q7 454 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 EVLQ9UI08 416 aaPredicted RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 USP18Q9UMW8 372 aa5.74□□□□□ -1.49
LINC00397-201ENST00000422074 APOBEC2Q9Y235 224 aaKnown RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 NOC2LQ9Y3T9 749 aaKnown RBP5.74□□□□□ -1.49
LINC00397-201ENST00000422074 NPIPB8E9PQR5 432 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 BRINP1O60477 761 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 MFAP3LO75121 409 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 SOX5P35711 763 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 ID4P47928 161 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 MAN2A2P49641 1150 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 FNDC7Q5VTL7 733 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 IGFL4Q6B9Z1 124 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 GLB1L2Q8IW92 636 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 GSPT2Q8IYD1 628 aaKnown RBP5.73□□□□□ -1.49
LINC00397-201ENST00000422074 AMER2Q8N7J2 671 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 ZNF341Q9BYN7 854 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 TOPORSQ9NS56 1045 aaPredicted RBP5.73□□□□□ -1.49
LINC00397-201ENST00000422074 PARPBPQ9NWS1 579 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 CDY2AQ9Y6F7 541 aa5.73□□□□□ -1.49
LINC00397-201ENST00000422074 IPO13O94829 963 aaKnown RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 EYA4O95677 639 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 PPARAQ07869 468 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 MRPL49Q13405 166 aaKnown RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 TOB2Q14106 344 aaPredicted RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 UBE3CQ15386 1083 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 FSCN1Q16658 493 aaKnown RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 DCAF17Q5H9S7 520 aaPredicted RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 LMBR1LQ6UX01 489 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 ZNF662Q6ZS27 426 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 MSL3Q8N5Y2 521 aaKnown RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 CHAC2Q8WUX2 184 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
LINC00397-201ENST00000422074 ORAI2Q96SN7 254 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 MNTQ99583 582 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 HS3ST3A1Q9Y663 406 aa5.72□□□□□ -1.49
LINC00397-201ENST00000422074 GRXCR1A8MXD5 290 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 STC2O76061 302 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 LTA4HP09960 611 aaKnown RBP5.71□□□□□ -1.5
LINC00397-201ENST00000422074 SLC25A3Q00325 362 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 MGAT5Q09328 741 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 STRN3Q13033 797 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 TUBA3CQ13748 450 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 CCDC62Q6P9F0 684 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 TUBA3EQ6PEY2 450 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 DOK3Q7L591 496 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
LINC00397-201ENST00000422074 ST8SIA2Q92186 375 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 ARL8AQ96BM9 186 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 ACAP3Q96P50 834 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 CSRNP2Q9H175 543 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 TRPS1Q9UHF7 1281 aa5.71□□□□□ -1.5
LINC00397-201ENST00000422074 GOLGA6L6A8MZA4 724 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 TMEM127O75204 238 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 ZNF202O95125 648 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 CLEC2LP0C7M8 214 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 ENPP1P22413 925 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 ABHD18Q0P651 414 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 CRHR2Q13324 411 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 CNGB1Q14028 1251 aaPredicted RBP5.7□□□□□ -1.5
LINC00397-201ENST00000422074 CT83Q5H943 113 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 UBR7Q8N806 425 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 OR52N2Q8NGI0 321 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 SNX33Q8WV41 574 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 RAX2Q96IS3 184 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 GPR87Q9BY21 358 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 KCTD10Q9H3F6 313 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 NCDNQ9UBB6 729 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 PRKAB1Q9Y478 270 aa5.7□□□□□ -1.5
LINC00397-201ENST00000422074 CFBP00751 764 aa5.69□□□□□ -1.5
LINC00397-201ENST00000422074 GYPEP15421 78 aa5.69□□□□□ -1.5
LINC00397-201ENST00000422074 MCM7P33993 719 aa5.69□□□□□ -1.5
LINC00397-201ENST00000422074 CASRP41180 1078 aa5.69□□□□□ -1.5
LINC00397-201ENST00000422074 GZMKP49863 264 aa5.69□□□□□ -1.5
LINC00397-201ENST00000422074 LGALS4P56470 323 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms